Clone BO34507 Report

Search the DGRC for BO34507

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:345
Well:7
Vector:pDNR-Dual
Associated Gene/TranscriptNufip-RA
Protein status:BO34507.pep: Imported from assembly
Sequenced Size:1567

Clone Sequence Records

BO34507.complete Sequence

1567 bp assembled on 2014-03-03

GenBank Submission: KX797506

> BO34507.complete
GAAGTTATCAGTCGACATGGAAGAAAAGGTTCTGCCGAAATTCGTATTAC
CGTCTCCAAAGTTCGGCAAGCCCAATGGATCCACCACATCCAATCACCTC
TACCTGACCCCCAGCGGGATGACCCTGCTGCCGCGCTCCAAGCAACCGCC
GCCCATGTACGGTGCACGAGGATCAACAGTGCCAGCTAAATATCTGCACC
AAGAACAAAGCAGCCCAGTGAGCGTACCTGCATCCCCGCCAGTTTACCAT
TCTCCTCCGCGACCGGAATTTTGTCACACATGTGTCATGGAGCTGGCCAA
CTCTCAGGATATGAAACTCCACCTGGAGCAACACGAGTTCTGCCCTGCCG
ATGACTGCGACTTTGCGGCGCTCCACAACATCCTGGAACGTCACATAGAA
TCCAATCACATCACAGGAACCTACGTAAAGGTAAAGAAAGTTTGGTCCGA
GGAAGAATTGGCCGCTTGGAGGGCAGAACGAAGAAAAAAATTTCCCACTG
CGGCCAATGTTGAGCTGGCTAGATTAGCCAAGGAACAGCGAATTAAACGC
GGAGAGCGCCTGGAGGCTTCGAAATCTCGCTTCGGAAACCGGGAAGATCG
CCAACGGACGCGAGGAGGACCCCAGGGAGATCACAAAGTTCGTTTCGATC
CGAAAAACAAGAAAAAGAGATGTGCCAAAGGGAAAGCCAATGAAAAGAAG
AAAAAACGTGTTGGTACTGATAAAGCAAACGAAGCTTTGAAGCAGAAAGA
AACTAATGAAGATAAAAAAGAAGAGGAAGTTAATTTGTGCTCCCTGGGAA
ATGCTAAATTTGGAGGAACTGGACAAATGCCGGAGTACCAGCACTTTAAG
GCAAAAGTTCAAAAGAAGGATAATGCTTTGTCTAGCTTTCTTGGAATGTA
CGGGTCAGATAGTGACGAAGAAAGTGAAGCTGAGAGTGATGATCAGAATA
CAGCAGACTGCAGTAAACAAATCCCAGCACAAGTAGAGAGCTCCCAAAGT
ATGCCATCTGAAATCACAGAAATGGGTCCAGCCCTTGAGGCTTCAAATAC
ACCTAACTCTGTTGATAATACTCAAACTTGTGAAGACTTTACACCTATGT
TGGAAATGACATCATCAGACCAAGTGCCGCGAGAAATAAGCAACATTAGT
CAAATAACTACATCTAACTCAGAGCCTGCCAAGGAAGATGGCTCCTCCGA
CGAAGGACCGGATGAAGAGCCCTTCCAGCGAGTGACCGAAACTATAACAG
CGTCAGATCCAGTCAAACCACCTCCTGAACCAATGGAACCGAAGCCACAA
ACTGCACCCAAAAGAGCAGCTCCAAAGCGAATTTATGGCTTGAACTACAA
GAGAGCGCGCAAGCAAACCCCGAACACTATGTTGTCGAAACTATTAGAAT
CCGATATACGCCATGAAAGAAATGTCCTGCTGCAGTGCGTGCGACATGTT
TGCGAGAGAAATTTCTTTGGCATTGGTCAAGCTAAACCAAATCAAGAAAC
GTTGGTTACCACTTGTGATAAAACCGTTGATTCAACACCGGATGCATTAG
CAAGCTTTCTAGACCAT

BO34507.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:57:59
Subject Length Description Subject Range Query Range Score Percent Strand
Nufip-RA 1536 CG4076-PA 1..1533 17..1549 7635 99.9 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:57:59
Subject Length Description Subject Range Query Range Score Percent Strand
Nufip-RA 1640 CG4076-RA 56..1592 13..1549 7640 99.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:57:57
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 18746659..18747718 1549..490 5300 100 Minus
3L 28110227 3L 18747776..18748056 489..209 1375 99.3 Minus
3L 28110227 3L 18748117..18748312 208..13 965 99.5 Minus
Blast to na_te.dros performed on 2014-11-28 14:57:58 has no hits.

BO34507.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-03-03 17:23:25 Download gff for BO34507.complete
Subject Subject Range Query Range Percent Splice Strand
Nufip-RA 60..1592 17..1551 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:28:01 Download gff for BO34507.complete
Subject Subject Range Query Range Percent Splice Strand
Nufip-RA 60..1592 17..1551 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:28:01 Download gff for BO34507.complete
Subject Subject Range Query Range Percent Splice Strand
3L 18746657..18747718 490..1551 99 <- Minus
3L 18747776..18748056 209..489 99 <- Minus
3L 18748117..18748308 17..208 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2014-03-03 17:23:25 Download gff for BO34507.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 18739757..18740818 490..1551 99 <- Minus
arm_3L 18740876..18741156 209..489 99 <- Minus
arm_3L 18741217..18741408 17..208 100   Minus

BO34507.pep Sequence

Translation from 16 to 1567

> BO34507.pep
MEEKVLPKFVLPSPKFGKPNGSTTSNHLYLTPSGMTLLPRSKQPPPMYGA
RGSTVPAKYLHQEQSSPVSVPASPPVYHSPPRPEFCHTCVMELANSQDMK
LHLEQHEFCPADDCDFAALHNILERHIESNHITGTYVKVKKVWSEEELAA
WRAERRKKFPTAANVELARLAKEQRIKRGERLEASKSRFGNREDRQRTRG
GPQGDHKVRFDPKNKKKRCAKGKANEKKKKRVGTDKANEALKQKETNEDK
KEEEVNLCSLGNAKFGGTGQMPEYQHFKAKVQKKDNALSSFLGMYGSDSD
EESEAESDDQNTADCSKQIPAQVESSQSMPSEITEMGPALEASNTPNSVD
NTQTCEDFTPMLEMTSSDQVPREISNISQITTSNSEPAKEDGSSDEGPDE
EPFQRVTETITASDPVKPPPEPMEPKPQTAPKRAAPKRIYGLNYKRARKQ
TPNTMLSKLLESDIRHERNVLLQCVRHVCERNFFGIGQAKPNQETLVTTC
DKTVDSTPDALASFLDH

BO34507.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:58:12
Subject Length Description Subject Range Query Range Score Percent Strand
Nufip-PA 511 CG4076-PA 1..511 1..511 2699 100 Plus