BO34508.complete Sequence
1204 bp assembled on 2013-10-29
GenBank Submission: KX798660
> BO34508.complete
GAAGTTATCAGTCGACATGGCCGAAGTTGCTGAAACCCCGAGTGTGGAAG
CCCAGGAAGAGGTAGCACAGCCCGCCGAGGCGCAGGTGCTGGAGGCGAAG
AACGGCGACGCCAAGAAGGACCCGGCTCCCGCAGCAGAGGAGGCCGCTGG
CGGCTTCACCAAACAGGAGCGCGCCATAATCCGGCAGGTAGAGTACTACT
TCGGCGATGCCAATCTGAATCGGGACAAGTTTCTGCGCGAGCAGATCGGC
AAGAACGAGGACGGCTGGGTGCCCCTGTCGGTGCTCGTTACCTTCAAGAG
ATTGGCCTCCCTGTCCACGGACTTATCTGAGATCGTGGCTGCCCTGAACA
AATCCGAGGAGGGCCTCGTGGAGATTAGCGAAGACAAACTTAGCCTGCGT
CGCCATCCGGAGCGTCCTATTCCAGAGCACAACGAAGAGCGGCGCAAGGA
GATCCAGGAACGGACCGCATACGCCAAGGGCTTCCCCCTAGATTCGCAGA
TTAGCGAACTGCTCGACTTTGCTGCCAACTACGACAAAGTGGTCAACCTG
ACCATGCGCAAGCACTATGACAAGCCCACCAAGTCGTACAAGTTCAAGGG
CAGCATCTTCCTTACTTTCGAGACCAAGGACCAGGCAAAGGCCTTCCTCG
AACAGGAGAAGATCGTTTATAAGGAGCGCGAGCTGCTGCGTAAATGGCAG
GTGGACTACCTTAAGGAGAAGCAGGAGGAATACGCCCAGAAGAACGAGAA
GCGCAAAAACAAAAAGGAGGCCAAGCCTGAGCCTGCCTTCGAGCTGCCCA
AGAACGCCATTGTTGTCTTCGAGGGCGCTCCGGAGACATCTAGCCGCGAG
GAAATTCGCGAAGCCTTCGAGAAGATCAAGGACTTCGAGGTGGCCTACAT
TGAGTTCGCCAAGGGCGAAACCAAGGGCTCTGTGCGGCTGACGGAGGCCG
ATGCGGCCGAAAAGTACATTGCCAAGGTGGAGGAAGGCAAGCTCAAGTTC
AAAGATGAGGTCTCTCTGTCGCTGCGAAAGGCCACCGAGGAGGAGGAGAA
GGAGTTCATCGACAAGGCCATAGAATTCATGAAGAAGCGACGCGATTTCA
CCAGGAACAAGGGCAAGCGCTTCAATCGCAAGCGCCACGGCGGAAACGAC
CACAAACATGGCGGTGGTAAGAAGGCGCGTGGGGATGCAAGCTTTCTAGA
CCAT
BO34508.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:13:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| La-RA | 1173 | CG10922-PA | 1..1170 | 17..1186 | 5820 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:13:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| La-RA | 1549 | CG10922-RA | 89..1258 | 17..1186 | 5820 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:13:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 20348950..20349924 | 991..17 | 4845 | 99.8 | Minus |
| 2L | 23513712 | 2L | 20348684..20348880 | 1186..990 | 985 | 100 | Minus |
Blast to na_te.dros performed 2014-11-28 14:13:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| gypsy3 | 6973 | gypsy3 GYPSY3 6973bp | 3084..3113 | 224..253 | 114 | 86.7 | Plus |
BO34508.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-10-29 16:45:40 Download gff for
BO34508.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| La-RA | 89..1258 | 17..1188 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:43:42 Download gff for
BO34508.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| La-RA | 89..1258 | 17..1188 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:43:42 Download gff for
BO34508.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 20348682..20348878 | 992..1188 | 98 | <- | Minus |
| 2L | 20348950..20349924 | 17..991 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-10-29 16:45:40 Download gff for
BO34508.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 20348682..20348878 | 992..1188 | 98 | <- | Minus |
| arm_2L | 20348950..20349924 | 17..991 | 99 | | Minus |
BO34508.pep Sequence
Translation from 16 to 1204
> BO34508.pep
MAEVAETPSVEAQEEVAQPAEAQVLEAKNGDAKKDPAPAAEEAAGGFTKQ
ERAIIRQVEYYFGDANLNRDKFLREQIGKNEDGWVPLSVLVTFKRLASLS
TDLSEIVAALNKSEEGLVEISEDKLSLRRHPERPIPEHNEERRKEIQERT
AYAKGFPLDSQISELLDFAANYDKVVNLTMRKHYDKPTKSYKFKGSIFLT
FETKDQAKAFLEQEKIVYKERELLRKWQVDYLKEKQEEYAQKNEKRKNKK
EAKPEPAFELPKNAIVVFEGAPETSSREEIREAFEKIKDFEVAYIEFAKG
ETKGSVRLTEADAAEKYIAKVEEGKLKFKDEVSLSLRKATEEEEKEFIDK
AIEFMKKRRDFTRNKGKRFNRKRHGGNDHKHGGGKKARGDASFLDH
BO34508.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:52:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| La-PA | 390 | CG10922-PA | 1..390 | 1..390 | 1985 | 100 | Plus |
| Larp7-PA | 595 | CG42569-PA | 17..334 | 2..350 | 240 | 25.1 | Plus |
