BO34511.complete Sequence
1027 bp assembled on 2013-10-29
GenBank Submission: KX798203
> BO34511.complete
GAAGTTATCAGTCGACATGAACTGGCGAAAGTTGTCCAAAAGCATGGTGC
TTTCTGTGGCCAAGAACTATGCTCAATCCGCCAGTTTTGCTGCCTGGATA
AATGCCATTACCTTTTACTTGATGTGCATGGGAAGGCGTCTCAACGATCG
ATTTGTATTCATATTTATACCATTTCTGCCCTGCTGGATTGCCTCGCAGT
TGAGTTGGTTGATGCCTCCTCAGGTGCTTCACTTCTTCGTGACGGGCATA
ACACCAGCGGCAATGGAAAGCCTAATGAGATATTTCAACATCGGTTTGGT
ACATTCACCCATGGCCCAGACTCTTCTGTTCATGATATCCTCGGTGATAG
TCTTGCATTACCAGCAGACTCGAAAGTACTCCGGTTTCTGGTTCATTCGA
CCAGCTTCTCTGCCCGAGGATACCGAAGATTGGACGATTTTGAAGCAAGT
GCAGCAGGGTATCAGGGAGTTGAGATCATACTTGGGCATTGGACTGGCAA
TGGATCTGCTCAATCCCTTGATGAAGCGAAACATGAAACTCTGGCGACCC
AAGATGACAAGTTTCTTGGCGGGCTACATAGGATTGTTTAAGGTGGTTCA
ATTACTTTTATTGAAAAGATTGAATGTAAATCAAGCCAATGCTCTGGCTT
CCTTTATAAGCGGTTCGTCGTTTGCTCTTCTATCAAATCGTCTCACATTC
ATGTGTTTTGCAATTGTAACTGCCATCCAGGTGATTTGGAGCCAGGTGTG
CAATACTAAAGATGAAAAGGATTCGGTTCTATCTGCAGTGCGAAAGATTC
CCTGGGCTAGACTGCTGATACCCTGTAGTCTGGCATACCTGGTGCACATT
TTCTTCTACCACCAAAGGCATCTCAATGAGATGGCCCGGAGTTTCATAGA
CTGCACGTGTGATAACAATGGCCAACGATTGTTGAATCTGATAGGTCTTC
CCAGTGTCAATGCGATACTACAAGCTGTGGATAGGACACCTAAAACTTCC
TTTTTGTTTGCAAGCTTTCTAGACCAT
BO34511.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:12:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31157-RD | 996 | CG31157-PD | 1..993 | 17..1009 | 4965 | 100 | Plus |
| CG31157-RC | 1164 | CG31157-PC | 169..1161 | 17..1009 | 4965 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:12:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31157-RD | 1324 | CG31157-RD | 209..1201 | 17..1009 | 4965 | 100 | Plus |
| CG31157-RC | 1319 | CG31157-RC | 204..1196 | 17..1009 | 4965 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:12:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 13048312..13048647 | 259..594 | 1680 | 100 | Plus |
| 3R | 32079331 | 3R | 13048699..13049030 | 587..918 | 1645 | 99.7 | Plus |
| 3R | 32079331 | 3R | 13048017..13048260 | 17..260 | 1220 | 100 | Plus |
| 3R | 32079331 | 3R | 13049081..13049171 | 919..1009 | 455 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 14:12:39 has no hits.
BO34511.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-10-29 16:45:28 Download gff for
BO34511.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31157-RC | 204..1196 | 17..1011 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:43:26 Download gff for
BO34511.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31157-RC | 204..1196 | 17..1011 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:43:26 Download gff for
BO34511.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 13048017..13048259 | 17..259 | 100 | -> | Plus |
| 3R | 13048313..13048645 | 260..592 | 100 | -> | Plus |
| 3R | 13048705..13049030 | 593..918 | 100 | -> | Plus |
| 3R | 13049081..13049171 | 919..1011 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-10-29 16:45:28 Download gff for
BO34511.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 8873739..8873981 | 17..259 | 100 | -> | Plus |
| arm_3R | 8874035..8874367 | 260..592 | 100 | -> | Plus |
| arm_3R | 8874427..8874752 | 593..918 | 100 | -> | Plus |
| arm_3R | 8874803..8874893 | 919..1011 | 97 | | Plus |
BO34511.pep Sequence
Translation from 16 to 1027
> BO34511.pep
MNWRKLSKSMVLSVAKNYAQSASFAAWINAITFYLMCMGRRLNDRFVFIF
IPFLPCWIASQLSWLMPPQVLHFFVTGITPAAMESLMRYFNIGLVHSPMA
QTLLFMISSVIVLHYQQTRKYSGFWFIRPASLPEDTEDWTILKQVQQGIR
ELRSYLGIGLAMDLLNPLMKRNMKLWRPKMTSFLAGYIGLFKVVQLLLLK
RLNVNQANALASFISGSSFALLSNRLTFMCFAIVTAIQVIWSQVCNTKDE
KDSVLSAVRKIPWARLLIPCSLAYLVHIFFYHQRHLNEMARSFIDCTCDN
NGQRLLNLIGLPSVNAILQAVDRTPKTSFLFASFLDH
BO34511.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:52:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31157-PD | 331 | CG31157-PD | 1..331 | 1..331 | 1721 | 100 | Plus |
| CG31157-PC | 387 | CG31157-PC | 57..387 | 1..331 | 1721 | 100 | Plus |
