BO34518.complete Sequence
712 bp assembled on 2013-10-29
GenBank Submission: KX799196
> BO34518.complete
GAAGTTATCAGTCGACATGAAATCTCTGGCCGGCGATAAATTTGCTCTGT
CCGAAGAGATTGGGCCACCGCCTTGTTCTCCCAAACACCGAAAAGCAAGT
GCCGTGAGTAGGGACACGGATACAAATAACCATCATGTGGTGCCGCTGGG
GATCCTCGTGGTGCTCTGCACTGTGTATCTCATGGTAGCCGGGATGCAGC
GCAACTACAGGCACTATTTTAAGCCGGGCGTGGCTGCCTTCGACCTGCAC
CATGCCCAGCCGGAAGCCATGGCCGACGCCGAATTGGATGTCGCCGCTCC
AGATGCATCGTGCCAGAGGTTGGACGTTTTCGGAAAGGAATCCAATCGGA
ATCAGGCAGTTTCAAGAAGATCCCAAGGCAGGCCCACGAAGAGAACCAAA
AACGGCACTGGAAATGGGGTCAGCAAGCAACCTCGTCGTTTGATAAAGTC
CCCGGAGGGGCACAAGAAGAAGGAAGTTGGCAAGAAGAGTAACACAGCGG
AGCCCATTATTTACCTGTTCGCCCTTGTGTTTGTCTATCTGCTTCTGAAG
GCCGCCTCGGACATCAACCAGCACTACAAGTCGAACAAAGGGGACAAGCG
ACTGCGCCGGTGCTCGCTGCAATCTTATGCCCAGATCCACAAGCAGGATC
GCCGGTCATCAAAAGGTATTTCACCAAAATCTTTGCCAAAGTTTGCAAGC
TTTCTAGACCAT
BO34518.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:13:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8248-RB | 681 | CG8248-PB | 1..678 | 17..694 | 3390 | 100 | Plus |
| CG8248-RA | 684 | CG8248-PA | 1..681 | 17..694 | 3325 | 99.6 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:13:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8248-RB | 1369 | CG8248-RB | 279..956 | 17..694 | 3390 | 100 | Plus |
| CG8248-RA | 1372 | CG8248-RA | 279..959 | 17..694 | 3325 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:13:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 8919524..8920090 | 583..17 | 2835 | 100 | Minus |
| 2R | 25286936 | 2R | 8919353..8919464 | 694..583 | 560 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 14:13:51 has no hits.
BO34518.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-10-29 16:45:54 Download gff for
BO34518.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8248-RB | 279..956 | 17..696 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:43:55 Download gff for
BO34518.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8248-RB | 279..956 | 17..696 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:43:55 Download gff for
BO34518.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 8919349..8919463 | 584..696 | 98 | <- | Minus |
| 2R | 8919524..8920090 | 17..583 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-10-29 16:45:54 Download gff for
BO34518.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 4806854..4806968 | 584..696 | 98 | <- | Minus |
| arm_2R | 4807029..4807595 | 17..583 | 100 | | Minus |
BO34518.pep Sequence
Translation from 16 to 712
> BO34518.pep
MKSLAGDKFALSEEIGPPPCSPKHRKASAVSRDTDTNNHHVVPLGILVVL
CTVYLMVAGMQRNYRHYFKPGVAAFDLHHAQPEAMADAELDVAAPDASCQ
RLDVFGKESNRNQAVSRRSQGRPTKRTKNGTGNGVSKQPRRLIKSPEGHK
KKEVGKKSNTAEPIIYLFALVFVYLLLKAASDINQHYKSNKGDKRLRRCS
LQSYAQIHKQDRRSSKGISPKSLPKFASFLDH
BO34518.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:52:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8248-PB | 226 | CG8248-PB | 1..226 | 1..226 | 1176 | 100 | Plus |
| CG8248-PA | 227 | CG8248-PA | 1..227 | 1..226 | 1164 | 99.6 | Plus |
