Clone BO34521 Report

Search the DGRC for BO34521

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:345
Well:21
Vector:pDNR-Dual
Associated Gene/TranscriptTctp-RA
Protein status:BO34521.pep: Imported from assembly
Sequenced Size:550

Clone Sequence Records

BO34521.complete Sequence

550 bp assembled on 2013-10-29

GenBank Submission: KX795881

> BO34521.complete
GAAGTTATCAGTCGACATGAAGATCTACAAGGATATCATCACCGGCGACG
AGATGTTTGCCGACACCTACAAGATGAAGCTGGTGGATGATGTGATCTAC
GAGGTGTACGGAAAGCTGATCACCCGCCAGGGTGACGATATCAAGCTGGA
GGGCGCCAACGCATCCGCCGAGGAGGCCGACGAGGGCACTGATATCACCT
CGGAGTCTGGCGTGGATGTTGTGCTTAACCACCGACTGACGGAGTGCTTC
GCCTTCGGCGACAAGAAGTCGTACACCCTCTACCTGAAGGACTACATGAA
GAAGGTGCTGGCCAAGCTGGAGGAGAAGTCGCCCGACCAGGTCGACATCT
TCAAGACCAACATGAACAAGGCCATGAAGGACATCCTTGGCCGCTTCAAG
GAGCTGCAGTTCTTCACCGGCGAATCTATGGACTGCGACGGCATGGTGGC
CCTGGTGGAATACCGCGAAATCAACGGCGACAGCGTGCCCGTGCTCATGT
TCTTCAAGCACGGTCTGGAGGAGGAGAAATGCGCAAGCTTTCTAGACCAT

BO34521.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:14:07
Subject Length Description Subject Range Query Range Score Percent Strand
Tctp-RB 519 CG4800-PB 1..516 17..532 2580 100 Plus
Tctp-RA 519 CG4800-PA 1..516 17..532 2580 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:14:08
Subject Length Description Subject Range Query Range Score Percent Strand
Tctp-RB 1652 CG4800-RB 134..650 16..532 2585 100 Plus
Tctp-RA 1036 CG4800-RA 134..650 16..532 2585 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:14:05
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 11210380..11210896 16..532 2585 100 Plus
Blast to na_te.dros performed on 2014-11-28 14:14:06 has no hits.

BO34521.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-10-29 16:45:58 Download gff for BO34521.complete
Subject Subject Range Query Range Percent Splice Strand
Tctp-RA 135..650 17..534 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:44:01 Download gff for BO34521.complete
Subject Subject Range Query Range Percent Splice Strand
Tctp-RA 135..650 17..534 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:44:01 Download gff for BO34521.complete
Subject Subject Range Query Range Percent Splice Strand
3R 11210381..11210896 17..534 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-10-29 16:45:58 Download gff for BO34521.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 7036103..7036618 17..534 99   Plus

BO34521.pep Sequence

Translation from 16 to 550

> BO34521.pep
MKIYKDIITGDEMFADTYKMKLVDDVIYEVYGKLITRQGDDIKLEGANAS
AEEADEGTDITSESGVDVVLNHRLTECFAFGDKKSYTLYLKDYMKKVLAK
LEEKSPDQVDIFKTNMNKAMKDILGRFKELQFFTGESMDCDGMVALVEYR
EINGDSVPVLMFFKHGLEEEKCASFLDH

BO34521.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:52:56
Subject Length Description Subject Range Query Range Score Percent Strand
Tctp-PB 172 CG4800-PB 1..172 1..172 890 100 Plus
Tctp-PA 172 CG4800-PA 1..172 1..172 890 100 Plus