Clone BO34522 Report

Search the DGRC for BO34522

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:345
Well:22
Vector:pDNR-Dual
Associated Gene/TranscriptCG14455-RB
Protein status:BO34522.pep: Imported from assembly
Sequenced Size:616

Clone Sequence Records

BO34522.complete Sequence

616 bp assembled on 2013-10-29

GenBank Submission: KX796273

> BO34522.complete
GAAGTTATCAGTCGACATGCGTAAGGAGGTCATCCGAAGCTGCTGTGCCG
TGGCCTTCATTTTGGTGGCTCTCATGCCCTTGACTGGAGCGTGGCGCTCT
TTCAAGGTCATCCTCACGAGCATTGACTTTGAGGCCAACGACAAGTTCCT
GGACCTTAAGGTCGATCTGCAAAACGATTCGGGCGAGTCAAATCTGAGCA
TCGATATAAAGACGCACCAGGACATAGAGGACGTTCAGCTGGTGGTAGAC
TTTGGTTTGGAGACGGACAAGGGCAACTACTCTACCCTGATAAACCGTAC
GCTCAACTTCTGCAAGCTGATGAAGCAGCGCAACTCGGATCCGCTGGTGC
GCGCGATCTACGAGGACCTTCTCAAGCACGGCACCCTCTTCAAGGAGTGC
CCAATCCGGAGCGGCACCTACAGCCTAACCAACTACAATGTGGACGAGGA
GATGCTGCCCAGCTTCCTGCCGGAGGCTAAGTTCCGCTTCGGCATGAAAA
TTTCGACGGACAAGGGCGGCATGATCGTACGGTCGACCATCTTCGGCCGC
ATCGACAAGTCCAAAGGCTTCGACAACCTGAAGCGGTTCAGTCTCGGCGC
AAGCTTTCTAGACCAT

BO34522.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:13:26
Subject Length Description Subject Range Query Range Score Percent Strand
CG14455-RB 585 CG14455-PB 1..582 17..598 2910 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:13:27
Subject Length Description Subject Range Query Range Score Percent Strand
CG14455-RB 663 CG14455-RB 5..586 17..598 2910 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:13:25
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 22686437..22686941 598..94 2525 100 Minus
3L 28110227 3L 22687006..22687083 94..17 390 100 Minus
Blast to na_te.dros performed on 2014-11-28 14:13:26 has no hits.

BO34522.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-10-29 16:45:43 Download gff for BO34522.complete
Subject Subject Range Query Range Percent Splice Strand
CG14455-RB 5..586 17..600 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:43:46 Download gff for BO34522.complete
Subject Subject Range Query Range Percent Splice Strand
CG14455-RB 5..586 17..600 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:43:46 Download gff for BO34522.complete
Subject Subject Range Query Range Percent Splice Strand
3L 22686435..22686940 95..600 99 <- Minus
3L 22687006..22687083 17..94 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-10-29 16:45:43 Download gff for BO34522.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 22679535..22680040 95..600 99 <- Minus
arm_3L 22680106..22680183 17..94 100   Minus

BO34522.pep Sequence

Translation from 16 to 616

> BO34522.pep
MRKEVIRSCCAVAFILVALMPLTGAWRSFKVILTSIDFEANDKFLDLKVD
LQNDSGESNLSIDIKTHQDIEDVQLVVDFGLETDKGNYSTLINRTLNFCK
LMKQRNSDPLVRAIYEDLLKHGTLFKECPIRSGTYSLTNYNVDEEMLPSF
LPEAKFRFGMKISTDKGGMIVRSTIFGRIDKSKGFDNLKRFSLGASFLDH

BO34522.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:52:37
Subject Length Description Subject Range Query Range Score Percent Strand
CG14455-PB 194 CG14455-PB 1..194 1..194 998 100 Plus
CG14456-PA 198 CG14456-PA 11..187 15..189 171 26.1 Plus
CG14456-PB 213 CG14456-PB 11..202 15..189 145 24.1 Plus