BO34522.complete Sequence
616 bp assembled on 2013-10-29
GenBank Submission: KX796273
> BO34522.complete
GAAGTTATCAGTCGACATGCGTAAGGAGGTCATCCGAAGCTGCTGTGCCG
TGGCCTTCATTTTGGTGGCTCTCATGCCCTTGACTGGAGCGTGGCGCTCT
TTCAAGGTCATCCTCACGAGCATTGACTTTGAGGCCAACGACAAGTTCCT
GGACCTTAAGGTCGATCTGCAAAACGATTCGGGCGAGTCAAATCTGAGCA
TCGATATAAAGACGCACCAGGACATAGAGGACGTTCAGCTGGTGGTAGAC
TTTGGTTTGGAGACGGACAAGGGCAACTACTCTACCCTGATAAACCGTAC
GCTCAACTTCTGCAAGCTGATGAAGCAGCGCAACTCGGATCCGCTGGTGC
GCGCGATCTACGAGGACCTTCTCAAGCACGGCACCCTCTTCAAGGAGTGC
CCAATCCGGAGCGGCACCTACAGCCTAACCAACTACAATGTGGACGAGGA
GATGCTGCCCAGCTTCCTGCCGGAGGCTAAGTTCCGCTTCGGCATGAAAA
TTTCGACGGACAAGGGCGGCATGATCGTACGGTCGACCATCTTCGGCCGC
ATCGACAAGTCCAAAGGCTTCGACAACCTGAAGCGGTTCAGTCTCGGCGC
AAGCTTTCTAGACCAT
BO34522.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:13:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14455-RB | 585 | CG14455-PB | 1..582 | 17..598 | 2910 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:13:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14455-RB | 663 | CG14455-RB | 5..586 | 17..598 | 2910 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:13:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 22686437..22686941 | 598..94 | 2525 | 100 | Minus |
3L | 28110227 | 3L | 22687006..22687083 | 94..17 | 390 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 14:13:26 has no hits.
BO34522.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-10-29 16:45:43 Download gff for
BO34522.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14455-RB | 5..586 | 17..600 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:43:46 Download gff for
BO34522.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14455-RB | 5..586 | 17..600 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:43:46 Download gff for
BO34522.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 22686435..22686940 | 95..600 | 99 | <- | Minus |
3L | 22687006..22687083 | 17..94 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-10-29 16:45:43 Download gff for
BO34522.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 22679535..22680040 | 95..600 | 99 | <- | Minus |
arm_3L | 22680106..22680183 | 17..94 | 100 | | Minus |
BO34522.pep Sequence
Translation from 16 to 616
> BO34522.pep
MRKEVIRSCCAVAFILVALMPLTGAWRSFKVILTSIDFEANDKFLDLKVD
LQNDSGESNLSIDIKTHQDIEDVQLVVDFGLETDKGNYSTLINRTLNFCK
LMKQRNSDPLVRAIYEDLLKHGTLFKECPIRSGTYSLTNYNVDEEMLPSF
LPEAKFRFGMKISTDKGGMIVRSTIFGRIDKSKGFDNLKRFSLGASFLDH
BO34522.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:52:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14455-PB | 194 | CG14455-PB | 1..194 | 1..194 | 998 | 100 | Plus |
CG14456-PA | 198 | CG14456-PA | 11..187 | 15..189 | 171 | 26.1 | Plus |
CG14456-PB | 213 | CG14456-PB | 11..202 | 15..189 | 145 | 24.1 | Plus |