BO34523.complete Sequence
340 bp assembled on 2013-10-29
GenBank Submission: KX799372
> BO34523.complete
GAAGTTATCAGTCGACATGTCCGCGACGAGCCTTGTAACCATTAAGTCGA
TCCCCTCAGCGGGAGATGTCCTGCGGGGTAAAAATGTACCAGTTCACCGC
CTCAACGCGAAGTTTGTGGCCAAGGCCCAGGAGAAGGCTAAGAAAGTGGA
GGAATTCCTGACTAGGACGAAGACCACTTCGTTGGTTTCCTTGTCAGGAC
TTGCTTCCCGATATGAGTTCCATCGTCTCCAGGAGCTCGACGAGTGGTAT
GAGCCAAGGATCAAGTTCCACGACGAGGCCGATGCCAGTTTGCATCCCAG
CTACGATATAAAGCACTTTCAGGCAAGCTTTCTAGACCAT
BO34523.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:13:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11286-RB | 309 | CG11286-PB | 1..306 | 17..322 | 1530 | 100 | Plus |
CG11286-RA | 576 | CG11286-PA | 1..306 | 17..322 | 1530 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:13:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11286-RB | 838 | CG11286-RB | 55..362 | 15..322 | 1540 | 100 | Plus |
CG11286-RA | 779 | CG11286-RA | 55..362 | 15..322 | 1540 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:13:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 7771395..7771702 | 322..15 | 1540 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 14:13:29 has no hits.
BO34523.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-10-29 16:45:46 Download gff for
BO34523.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11286-RA | 57..362 | 17..324 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:43:48 Download gff for
BO34523.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11286-RA | 57..362 | 17..324 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:43:48 Download gff for
BO34523.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 7771393..7771700 | 17..324 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-10-29 16:45:46 Download gff for
BO34523.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 3597115..3597422 | 17..324 | 99 | | Minus |
BO34523.pep Sequence
Translation from 16 to 340
> BO34523.pep
MSATSLVTIKSIPSAGDVLRGKNVPVHRLNAKFVAKAQEKAKKVEEFLTR
TKTTSLVSLSGLASRYEFHRLQELDEWYEPRIKFHDEADASLHPSYDIKH
FQASFLDH
BO34523.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:52:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11286-PB | 102 | CG11286-PB | 1..102 | 1..102 | 520 | 100 | Plus |
CG11286-PA | 191 | CG11286-PA | 1..102 | 1..102 | 520 | 100 | Plus |