BO34524.complete Sequence
670 bp assembled on 2013-11-20
> BO34524.complete
GAAGTTATCAGTCGACATGCCACACAGCCGGATCCATACAATGTGGCCCA
TTATGATAGGTGTAATCATCGCCAGCTCGTGCTGCGTAGACGGCCAGTCC
TATCTCTTCAGCGTGGAGAACGTTCTCCACGAGTCCGCCCGCCCACTGCC
CTACAACTTGACAAACGCCAACGGAACCACCGAGGTGGAATTGTTTCCCG
ACACCATCTCAAACAACACGCGGATTATTGTCTACAAGAACACTGTCGTC
GAGTCGCCCAACGATCTGTCCCAGACGGCAATGGATGTGATCACGATTGT
GTGGTATGTGGCCACTTTCCTGGCCCTGGCCGCCTTCTTCATGCTGATGG
CCTGTTCGGATCGCAGATGCCGCGACATGAGGCGTCGTCCCGCCGGAGGT
CAATCCACCGAGGGTCTGAGGGCACCACCCACGCCCTCGCCATCCTACAG
CGAATTTGCGCCTCCCAGCTACGATACGGTGATCAAGATGCAGCACGCGG
CCAAGACGAGCGTGTTTGTGATACCGTTCAGCAACAAGGCCGGTGAATTG
GGTGCACCACCGTCGGGTACGCCGCCCCCAACTTCCAACCCATTGCCAGC
CGCAGTCACCTGCGATGTGATCATCGTCAATGAACTGCAGAAGTCCGCTG
ACGCAAGCTTTCTAGACCAT
BO34524.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:35:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15673-RC | 615 | CG15673-PC | 1..612 | 41..652 | 3060 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:35:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15673-RC | 1143 | CG15673-RC | 243..879 | 16..652 | 3185 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:35:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 21608657..21609066 | 652..243 | 2050 | 100 | Minus |
2R | 25286936 | 2R | 21609779..21609959 | 242..62 | 905 | 100 | Minus |
2R | 25286936 | 2R | 21612783..21612829 | 62..16 | 235 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 14:35:26 has no hits.
BO34524.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-11-20 11:38:33 Download gff for
BO34524.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15673-RC | 244..879 | 17..654 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:17:44 Download gff for
BO34524.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15673-RC | 244..879 | 17..654 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:17:44 Download gff for
BO34524.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 21608655..21609066 | 243..654 | 99 | <- | Minus |
2R | 21609779..21609958 | 63..242 | 100 | <- | Minus |
2R | 21612783..21612828 | 17..62 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-11-20 11:38:33 Download gff for
BO34524.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 17496160..17496571 | 243..654 | 99 | <- | Minus |
arm_2R | 17497284..17497463 | 63..242 | 100 | <- | Minus |
arm_2R | 17500288..17500333 | 17..62 | 100 | | Minus |
BO34524.pep Sequence
Translation from 16 to 670
> BO34524.pep
MPHSRIHTMWPIMIGVIIASSCCVDGQSYLFSVENVLHESARPLPYNLTN
ANGTTEVELFPDTISNNTRIIVYKNTVVESPNDLSQTAMDVITIVWYVAT
FLALAAFFMLMACSDRRCRDMRRRPAGGQSTEGLRAPPTPSPSYSEFAPP
SYDTVIKMQHAAKTSVFVIPFSNKAGELGAPPSGTPPPTSNPLPAAVTCD
VIIVNELQKSADASFLDH
BO34524.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:46:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15673-PC | 204 | CG15673-PC | 1..204 | 9..212 | 1066 | 100 | Plus |