Clone BO34524 Report

Search the DGRC for BO34524

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:345
Well:24
Vector:pDNR-Dual
Protein status:BO34524.pep: Imported from assembly
Sequenced Size:670

Clone Sequence Records

BO34524.complete Sequence

670 bp assembled on 2013-11-20

> BO34524.complete
GAAGTTATCAGTCGACATGCCACACAGCCGGATCCATACAATGTGGCCCA
TTATGATAGGTGTAATCATCGCCAGCTCGTGCTGCGTAGACGGCCAGTCC
TATCTCTTCAGCGTGGAGAACGTTCTCCACGAGTCCGCCCGCCCACTGCC
CTACAACTTGACAAACGCCAACGGAACCACCGAGGTGGAATTGTTTCCCG
ACACCATCTCAAACAACACGCGGATTATTGTCTACAAGAACACTGTCGTC
GAGTCGCCCAACGATCTGTCCCAGACGGCAATGGATGTGATCACGATTGT
GTGGTATGTGGCCACTTTCCTGGCCCTGGCCGCCTTCTTCATGCTGATGG
CCTGTTCGGATCGCAGATGCCGCGACATGAGGCGTCGTCCCGCCGGAGGT
CAATCCACCGAGGGTCTGAGGGCACCACCCACGCCCTCGCCATCCTACAG
CGAATTTGCGCCTCCCAGCTACGATACGGTGATCAAGATGCAGCACGCGG
CCAAGACGAGCGTGTTTGTGATACCGTTCAGCAACAAGGCCGGTGAATTG
GGTGCACCACCGTCGGGTACGCCGCCCCCAACTTCCAACCCATTGCCAGC
CGCAGTCACCTGCGATGTGATCATCGTCAATGAACTGCAGAAGTCCGCTG
ACGCAAGCTTTCTAGACCAT

BO34524.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:35:27
Subject Length Description Subject Range Query Range Score Percent Strand
CG15673-RC 615 CG15673-PC 1..612 41..652 3060 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:35:28
Subject Length Description Subject Range Query Range Score Percent Strand
CG15673-RC 1143 CG15673-RC 243..879 16..652 3185 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:35:25
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 21608657..21609066 652..243 2050 100 Minus
2R 25286936 2R 21609779..21609959 242..62 905 100 Minus
2R 25286936 2R 21612783..21612829 62..16 235 100 Minus
Blast to na_te.dros performed on 2014-11-28 14:35:26 has no hits.

BO34524.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-11-20 11:38:33 Download gff for BO34524.complete
Subject Subject Range Query Range Percent Splice Strand
CG15673-RC 244..879 17..654 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:17:44 Download gff for BO34524.complete
Subject Subject Range Query Range Percent Splice Strand
CG15673-RC 244..879 17..654 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:17:44 Download gff for BO34524.complete
Subject Subject Range Query Range Percent Splice Strand
2R 21608655..21609066 243..654 99 <- Minus
2R 21609779..21609958 63..242 100 <- Minus
2R 21612783..21612828 17..62 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-11-20 11:38:33 Download gff for BO34524.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 17496160..17496571 243..654 99 <- Minus
arm_2R 17497284..17497463 63..242 100 <- Minus
arm_2R 17500288..17500333 17..62 100   Minus

BO34524.pep Sequence

Translation from 16 to 670

> BO34524.pep
MPHSRIHTMWPIMIGVIIASSCCVDGQSYLFSVENVLHESARPLPYNLTN
ANGTTEVELFPDTISNNTRIIVYKNTVVESPNDLSQTAMDVITIVWYVAT
FLALAAFFMLMACSDRRCRDMRRRPAGGQSTEGLRAPPTPSPSYSEFAPP
SYDTVIKMQHAAKTSVFVIPFSNKAGELGAPPSGTPPPTSNPLPAAVTCD
VIIVNELQKSADASFLDH

BO34524.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:46:31
Subject Length Description Subject Range Query Range Score Percent Strand
CG15673-PC 204 CG15673-PC 1..204 9..212 1066 100 Plus