Clone BO34528 Report

Search the DGRC for BO34528

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:345
Well:28
Vector:pDNR-Dual
Associated Gene/TranscriptCG32264-RK
Protein status:BO34528.pep: Imported from assembly
Sequenced Size:2500

Clone Sequence Records

BO34528.complete Sequence

2500 bp assembled on 2014-03-03

GenBank Submission: KX796884

> BO34528.complete
GAAGTTATCAGTCGACATGTCAGACACTAAATCCGAAATTGAGGGCTTTA
TAGCCATTCCCACGACATCGGGCGAACAACAACAACAACAGCCGCAACAG
CAGCAAAATGAGCAACAAGTGGTCGGCACAAAGGACATTAAAGCTCCTGA
TCAGGCAAGGACAATTGTGGATCCTCCGACGCCCTCGGCTGAGTCCTGCA
ACTCCTTCGATATCTTTGAGCCACCTGCCACGCCCCTGGATTCCATTAGC
CTCAAGAGCAGTGCCAGTAGTTACCTCTACGATCGTGATATTACAGCTAA
GAAACAGAATGGAGCTGCCATACGCACAAATAGCCTGGGTTCGGGCACTA
GGACGCCACCTTTGGAAAGGAAGAGCAAACTCAGTGCCCTGGGCAGATTC
TTTAAGCCCTGGAAATGGCGACGGAAAAAGAAGAGCGAGAAGTTCGAGGC
GGCCTCCAAATCCCTGGAGCGTAAGATTTCTGTGCGTGCCAATCGTGATG
AGCTAGTGCAAAAGGGGATTCTAATGCCTGAGAGTCCCCTGGGCAATATT
CCAGAACCAGGCGAGGAGTCGTATTATAACAACAGCAATAGTGGAGCCAC
CGCGAATGGATCCCTGCTCAACTCAGCCGTCCACAATAATTCCATGAGCC
AGGCCAATAATTCCATAAATGCCACCACCGGCAATCCGCTCATCTCCGCC
GCCCAGCAGCAGCTGAACCAGGGACTTCCCAACTCGATCTCCGTGCAGCA
GTTCAACGGTCAGAACCAGAATCCACAGAATTCCATGGCCAATGGCCTAG
TGGGTGGCGGCGGCGGCGGTGGAGACGGTTCCTCGGACACGTCTTCCCTC
AGCGGCGGCGTTCCGCACTCGCAGTCGGCGCCCCAGCAACTGGGGGTGGG
GCAACCACCACCACCCCTAACACCACTGGCCCAGCACCACCAGGCGCTGG
CACAGCAGCTGCAGCAGCGATTCGCCATCAGCAACAATAACGAACCAAGA
AAAGACAAGACTGATGCACAACAACAACAACACGGAGGCAATGGCACAAT
ATCCACGCCCAACATCGAGCAGCCCACCTGCCAGGGCTCGATGCTGCCGC
CCCCCGGAGGCGGTGGCCATCACCAGGTGGACGGGAGTGGCAAGATGGAG
CGGCCCAACACGCTCGCCGGCGCCAATAAGCTGACCCGTCGCGGGGTCAA
CATCTGCTATCACAACGAGCACATGTATGGCGAAGATGGAAAAATGGTGG
GTGGTCCGCCGGGCAGCACTCCGCCCCCGTATCCGGGTGGCAAACTACCG
CCGGGCGTAATGCTCAGCGAACTGCCGGAGCCGCCGATTCCGCTGTCGGA
GATCGGACCGATCCCACCGCCCCCGATGTTCTCCACTCCGAGTCCCACGC
TCATCGCAGGACGACCGCACGGGCCAGGGGCCGTCAACGATCAGGATTAT
CAGCAGGACTACGACTACGATGATAACGATCCCGATCAGGATGAGCTTGA
CTCGGACGATGAGTACGCCCCGTATGGTGGCAACCATGTGCGCATGATGG
ACACGCAACGCGTCGAGGAAATTCCAGCCAAAGAGCCCAAACCAAATGCA
GTTCCTCTCAAGTCGGCGCTGAAGAAGAAGGGCGGTATGCAGCCCGCTTC
CGCCTCCACGCCGGTCACGCCCACCCAGGAACATGGAGCGGGAAGTGCGG
CAACGGCAGCGGCCATGGCAAACAGCAATGGCGGTATTGGCTCGATGGCG
GCAGCTGCCGCAGCTGCGGCCCAACAATCCGCCAACCAACGACCGCTGGT
CGTTCGCCAGGATGCGGCGGGCAATAACTATTCGCTCAACAGGCAGCAAA
TGTTCAACATCCAATTGCCGTGCACCGTGGAGAACAAGGAGAACGCCCGG
CCATTTGTGATACGCGAAAGCAGCAGCGATAGTGACGACAGCGATGGCCA
TATCGTCTACAGGGACGAGGACAACGACAACACCCGGCTGGCCAAACTGG
CCCGCAAGGAGTCGCTGTCCCTGAAGCTGCAGCTCCGACCGGACAAGCAG
GACCTGATCAACCGCAACATCCTGCACCAGGTCAACGACAACGAGCTCAA
GGAGTCCAAGGAGGCGATCGGAGCACGCCTCATCCGGCGGCTGTCCATGC
GACCCACGGCCGAGGAGCTGGTCGAGCGCAACATCTTGAAAACTCAATCA
CCCGCCGAGGAGAAGAAGCAGAAGGAGGAGAAGAAGTCGTATCTGTTGCG
CAAACTCAGCTTTCGGCCGACCGTCGAGGAGCTGAAGGAGAAGAAGATCA
TCCGATTCAACGACTACATCGAGGTCACGCAGGCCCACGACTACGATCGG
CGGGCGGACAAGCCGTGGACAAGACTGACGCCAAAGGACAAGGCCGCCAT
TCGCAAGGAGCTGAACGAGTTCAAGTCCTCCGAAATGGCCGTCCACGAGG
GCAGTCGGCATTTGACGAGATTCCATAGGCCAGCAAGCTTTCTAGACCAT

BO34528.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:58:02
Subject Length Description Subject Range Query Range Score Percent Strand
CG32264-RK 2469 CG32264-PK 1..2466 17..2482 12330 100 Plus
CG32264-RM 2784 CG32264-PM 594..2781 295..2482 10940 100 Plus
CG32264-RL 2280 CG32264-PL 90..2277 295..2482 10940 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:58:04
Subject Length Description Subject Range Query Range Score Percent Strand
CG32264-RK 5535 CG32264-RK 501..2966 17..2482 12330 100 Plus
CG32264-RM 3767 CG32264-RM 1402..3589 295..2482 10940 100 Plus
CG32264-RL 2798 CG32264-RL 433..2620 295..2482 10940 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:58:01
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 3767137..3767571 992..558 2175 100 Minus
3L 28110227 3L 3722156..3722523 1839..1472 1840 100 Minus
3L 28110227 3L 3718638..3718990 2192..1840 1765 100 Minus
3L 28110227 3L 3718196..3718472 2469..2193 1385 100 Minus
3L 28110227 3L 3722856..3723105 1476..1227 1235 99.6 Minus
3L 28110227 3L 3723639..3723873 1226..992 1175 100 Minus
3L 28110227 3L 3769242..3769413 461..290 845 99.4 Minus
3L 28110227 3L 3803314..3803455 296..155 710 100 Minus
3L 28110227 3L 3805821..3805959 155..17 695 100 Minus
3L 28110227 3L 3769077..3769176 561..462 500 100 Minus
Blast to na_te.dros performed 2014-11-28 14:58:01
Subject Length Description Subject Range Query Range Score Percent Strand
Damb\P-element_T 3329 Damb\P-element_T P_T 3329bp Derived from AF012414. 877..942 1955..1890 123 65.2 Minus

BO34528.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-03-03 17:23:27 Download gff for BO34528.complete
Subject Subject Range Query Range Percent Splice Strand
CG32264-RK 501..2966 17..2484 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:28:03 Download gff for BO34528.complete
Subject Subject Range Query Range Percent Splice Strand
CG32264-RK 501..2966 17..2484 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:28:03 Download gff for BO34528.complete
Subject Subject Range Query Range Percent Splice Strand
3L 3718196..3718472 2193..2469 100 <- Minus
3L 3718638..3718990 1840..2192 100 <- Minus
3L 3722156..3722522 1473..1839 100 <- Minus
3L 3722860..3723105 1227..1472 100 <- Minus
3L 3723639..3723872 993..1226 100 <- Minus
3L 3767137..3767568 561..992 100 <- Minus
3L 3769078..3769176 462..560 100 <- Minus
3L 3769242..3769406 297..461 100 <- Minus
3L 3803314..3803454 156..296 100 <- Minus
3L 3805821..3805959 17..155 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2014-03-03 17:23:27 Download gff for BO34528.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 3718196..3718472 2193..2469 100 <- Minus
arm_3L 3718638..3718990 1840..2192 100 <- Minus
arm_3L 3722156..3722522 1473..1839 100 <- Minus
arm_3L 3722860..3723105 1227..1472 100 <- Minus
arm_3L 3723639..3723872 993..1226 100 <- Minus
arm_3L 3767137..3767568 561..992 100 <- Minus
arm_3L 3769078..3769176 462..560 100 <- Minus
arm_3L 3769242..3769406 297..461 100 <- Minus
arm_3L 3803314..3803454 156..296 100 <- Minus
arm_3L 3805821..3805959 17..155 100   Minus

BO34528.pep Sequence

Translation from 16 to 2500

> BO34528.pep
MSDTKSEIEGFIAIPTTSGEQQQQQPQQQQNEQQVVGTKDIKAPDQARTI
VDPPTPSAESCNSFDIFEPPATPLDSISLKSSASSYLYDRDITAKKQNGA
AIRTNSLGSGTRTPPLERKSKLSALGRFFKPWKWRRKKKSEKFEAASKSL
ERKISVRANRDELVQKGILMPESPLGNIPEPGEESYYNNSNSGATANGSL
LNSAVHNNSMSQANNSINATTGNPLISAAQQQLNQGLPNSISVQQFNGQN
QNPQNSMANGLVGGGGGGGDGSSDTSSLSGGVPHSQSAPQQLGVGQPPPP
LTPLAQHHQALAQQLQQRFAISNNNEPRKDKTDAQQQQHGGNGTISTPNI
EQPTCQGSMLPPPGGGGHHQVDGSGKMERPNTLAGANKLTRRGVNICYHN
EHMYGEDGKMVGGPPGSTPPPYPGGKLPPGVMLSELPEPPIPLSEIGPIP
PPPMFSTPSPTLIAGRPHGPGAVNDQDYQQDYDYDDNDPDQDELDSDDEY
APYGGNHVRMMDTQRVEEIPAKEPKPNAVPLKSALKKKGGMQPASASTPV
TPTQEHGAGSAATAAAMANSNGGIGSMAAAAAAAAQQSANQRPLVVRQDA
AGNNYSLNRQQMFNIQLPCTVENKENARPFVIRESSSDSDDSDGHIVYRD
EDNDNTRLAKLARKESLSLKLQLRPDKQDLINRNILHQVNDNELKESKEA
IGARLIRRLSMRPTAEELVERNILKTQSPAEEKKQKEEKKSYLLRKLSFR
PTVEELKEKKIIRFNDYIEVTQAHDYDRRADKPWTRLTPKDKAAIRKELN
EFKSSEMAVHEGSRHLTRFHRPASFLDH

BO34528.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:58:19
Subject Length Description Subject Range Query Range Score Percent Strand
CG32264-PK 822 CG32264-PK 1..822 1..822 4294 100 Plus
CG32264-PE 998 CG32264-PE 147..998 20..822 3821 88.1 Plus
CG32264-PM 927 CG32264-PM 199..927 94..822 3819 100 Plus
CG32264-PL 759 CG32264-PL 31..759 94..822 3819 100 Plus
CG32264-PD 1008 CG32264-PD 147..1008 20..822 3794 87 Plus