BO34529.complete Sequence
2281 bp assembled on 2014-03-03
GenBank Submission: KX798212
> BO34529.complete
GAAGTTATCAGTCGACATGGGCACCAATTCGGGAGCCACCGCTGGCATAA
ACAACAAGCCGGTTGGCGGTGCAACAGGAGCCGGCGTCCTTGTAGGCGGC
GGTGTGGGCGGTGCCAATTCCTCGATCGGCGGTGTCCTGTCGAACAGCCT
GGGCGGTGGCGGCAGCGGCGGTCTGAGCATCAGCGGCCTCAACGCTGGTG
GACAGAACGCCAATGTGGGCGGAATGGGCAACGTTGGCGGCGACGACGGC
GGAAACGGGATGGTGGGCGGCGGTGTAAATAACCAGCAGGCCACAACGCC
CCAATACACAATACCGGGCATCTTGCACTTCATCCAGCACGAGTGGTCGC
GCTTCGAGCTGGAGCGATCACAGTGGGACGTGGACAGGGCCGAATTGCAG
GCTCGCATTGCTATGCTGCTTGGAGAGCGCAAGTGCTTGGAAAGCCTCAA
ATCGGATTTGACGCGCCGCATCAAGATGCTGGAGTACGCACTGCGCCAGG
AGCGTGCGAAATTCTATCGTTTAAAATACGGCACCGATCCGCCGCAGCTC
AATGAGTTCAAGCCATCGAACGAGGATGCCGGACTGGCCGGTGAGGTGGC
CACTGACTCGGAGGTGCCCTACAGCAGTGTCTCGAACACTACGTGGCGGC
AGGGGCGTCAGATGCTGCGACAGTATCTGGCCGAGATTGGCTACACAGAC
AACATCATCGATGTGCGTTCAAATCGGGTGCGTTCGATCCTTGGCCTAAA
CAATAATGCCGAGCACGACGGCAGCGGCGGAGGACTGGGTGGTGGACTTG
GCGGCGGCACCGGCGGCGAGAACCTTAGCCCAAACATCAATGGAAACGAG
AGCAACAAACGCGCATCGGAGACGGAAGGCCGTCATACTCCCGCTAAAAA
AGTGCAACAATCGATCGATGAAATAATCGTGGACACCGAGGCAGCTGTGA
TGGCGAACTTTGAGTTCCTGGGCGCCACCGAGATGTCCGACGACGACGAG
ATATCTGACGATCTGGAAATGGTGGCCACCGACAATGACGACACAGACGT
AAAGCTGGCCAAGCGCGCCAAGTCTGGCAAGGATATGCTCACCGAGGATC
TAGAGGCCGATGTGGGAGAGCAGCTATTGAACGATATGAATCTCATGACT
GAAGAGGTGGACGGCTCGTTGGGACTGGGTGAGCTTGCCCAGCTGACGGT
GAATAACGAATCTGATGGCGCCTACGATGCGAACTCCAAGGATGGAACTG
GCGGCAGTGCCGGCGGTGCTGGTTACCGCAAAACCTGGAACGCCAAGTAC
ACGCTTCGCTCGCACTTTGACGGAGTACGATCACTTATCTTTCACCCAGA
GGAGCCGGTGCTGATCACGGCTTCCGAGGATCATACGCTTAAGCTGTGGA
ACCTTCAGAAGACGGTGCAGGCCAAAAAGTCGGCCAGCTTGGATGTGGAA
CCGCTGTATACGTTCAGGGCCCATACGGGTCCAGTTCTGTGCCTGGGCAT
GTCGTCCAGCGGCGAGACATGCTATTCGGGCGGGCTGGACGGTAACATTG
AATGCTGGCAATTGCCGTCGCCGAATATCGATCCGTACGATTGCTATGAT
CCGAACGTGCATTCCGGCACGCTCGAGGGGCATACGGATGCCGTGTGGGG
CCTTACCACCATGCAAAGCAACATTGTGTCATGCTCAGCGGATGGAACGG
TTAAGCTGTGGTCGCCATACAATAAGGAACCGCTGCTGCGCACATACACA
GCCTCCGAGGCAGAGGGTGTACCCTCATCCGTTGACTTTGTTCGCAATGA
GGTTGACCATATCGTGGTGGCCTACAACAGTGCCCACTGCATCGTGTACG
ATACGGAGACGGGCAAGCAGGTGGTGCGTCTGGAGGCGGCGCAGGAGATG
TCTGGCAACACGGGGAAGTTCATTAACAAGGTGGTGTCACACCCAACGCT
ACCCATTACGATAACCGCGCACGAGGATCGTCACATCCGCTTCTGGGACA
ACACATCCGGCACGCTGGTACACTCCATGGTGGCGCATTTAGAGCCGGTC
ACCTCGCTGGCCGTCGATGCTCATGGCCTGTATTTGCTATCCGGCTCGCA
CGACTGCTCGATACGGCTGTGGAACCTGGACAATAAGACGTGCGTGCAGG
AGATCACAGCGCATCGCAAGAAGTTTGACGAGAGCATATTCGATGTGGCC
TTCCATGCCACAAAGCCGTACATTGCTAGTGCCGGGGCCGATGGCCTCGC
CAAGGTCTTTGTCGCAAGCTTTCTAGACCAT
BO34529.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:58:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cka-RE | 2250 | CG7392-PE | 1..2247 | 17..2263 | 11235 | 100 | Plus |
| Cka-RF | 2244 | CG7392-PF | 1..2241 | 17..2263 | 11110 | 99.7 | Plus |
| Cka-RG | 2169 | CG7392-PG | 1057..2166 | 1154..2263 | 5550 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:58:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cka-RE | 2819 | CG7392-RE | 318..2564 | 17..2263 | 11235 | 100 | Plus |
| Cka-RF | 5366 | CG7392-RF | 498..2738 | 17..2263 | 11110 | 99.7 | Plus |
| Cka-RG | 2738 | CG7392-RG | 1374..2483 | 1154..2263 | 5550 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:58:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 8037088..8038198 | 1153..2263 | 5555 | 100 | Plus |
| 2L | 23513712 | 2L | 8035817..8036299 | 397..879 | 2415 | 100 | Plus |
| 2L | 23513712 | 2L | 8032258..8032642 | 17..401 | 1925 | 100 | Plus |
| 2L | 23513712 | 2L | 8036356..8036576 | 877..1097 | 1105 | 100 | Plus |
| 2L | 23513712 | 2L | 8036836..8036893 | 1097..1154 | 290 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 14:58:05 has no hits.
BO34529.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-03-03 17:23:29 Download gff for
BO34529.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cka-RE | 318..2564 | 17..2265 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:28:05 Download gff for
BO34529.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cka-RE | 318..2564 | 17..2265 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:28:05 Download gff for
BO34529.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 8032258..8032641 | 17..400 | 100 | -> | Plus |
| 2L | 8035821..8036298 | 401..878 | 100 | -> | Plus |
| 2L | 8036358..8036576 | 879..1097 | 100 | -> | Plus |
| 2L | 8036837..8036893 | 1098..1154 | 100 | -> | Plus |
| 2L | 8037090..8038198 | 1155..2265 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-03-03 17:23:29 Download gff for
BO34529.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 8032258..8032641 | 17..400 | 100 | -> | Plus |
| arm_2L | 8035821..8036298 | 401..878 | 100 | -> | Plus |
| arm_2L | 8036358..8036576 | 879..1097 | 100 | -> | Plus |
| arm_2L | 8036837..8036893 | 1098..1154 | 100 | -> | Plus |
| arm_2L | 8037090..8038198 | 1155..2265 | 99 | | Plus |
BO34529.pep Sequence
Translation from 16 to 2281
> BO34529.pep
MGTNSGATAGINNKPVGGATGAGVLVGGGVGGANSSIGGVLSNSLGGGGS
GGLSISGLNAGGQNANVGGMGNVGGDDGGNGMVGGGVNNQQATTPQYTIP
GILHFIQHEWSRFELERSQWDVDRAELQARIAMLLGERKCLESLKSDLTR
RIKMLEYALRQERAKFYRLKYGTDPPQLNEFKPSNEDAGLAGEVATDSEV
PYSSVSNTTWRQGRQMLRQYLAEIGYTDNIIDVRSNRVRSILGLNNNAEH
DGSGGGLGGGLGGGTGGENLSPNINGNESNKRASETEGRHTPAKKVQQSI
DEIIVDTEAAVMANFEFLGATEMSDDDEISDDLEMVATDNDDTDVKLAKR
AKSGKDMLTEDLEADVGEQLLNDMNLMTEEVDGSLGLGELAQLTVNNESD
GAYDANSKDGTGGSAGGAGYRKTWNAKYTLRSHFDGVRSLIFHPEEPVLI
TASEDHTLKLWNLQKTVQAKKSASLDVEPLYTFRAHTGPVLCLGMSSSGE
TCYSGGLDGNIECWQLPSPNIDPYDCYDPNVHSGTLEGHTDAVWGLTTMQ
SNIVSCSADGTVKLWSPYNKEPLLRTYTASEAEGVPSSVDFVRNEVDHIV
VAYNSAHCIVYDTETGKQVVRLEAAQEMSGNTGKFINKVVSHPTLPITIT
AHEDRHIRFWDNTSGTLVHSMVAHLEPVTSLAVDAHGLYLLSGSHDCSIR
LWNLDNKTCVQEITAHRKKFDESIFDVAFHATKPYIASAGADGLAKVFVA
SFLDH
BO34529.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:58:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cka-PE | 749 | CG7392-PE | 1..749 | 1..749 | 3928 | 100 | Plus |
| Cka-PF | 747 | CG7392-PF | 1..747 | 1..749 | 3905 | 99.7 | Plus |
| Cka-PC | 730 | CG7392-PC | 1..730 | 1..749 | 3803 | 97.5 | Plus |
| Cka-PD | 730 | CG7392-PD | 1..730 | 1..749 | 3803 | 97.5 | Plus |
| Cka-PB | 730 | CG7392-PB | 1..730 | 1..749 | 3803 | 97.5 | Plus |
