BO34532.complete Sequence
1042 bp assembled on 2013-10-29
GenBank Submission: KX797311
> BO34532.complete
GAAGTTATCAGTCGACATGGATGAGATTTTCAGTTTATATTGCACAATAC
AGAAGAATAGGCAAGTAATGGAGCAGCTAGACAAGGAGTGCGAAACCATC
AATGTGGATGATGTGCTTTCCAAGCCGGCGGCAGCCAACACCGAATCTGC
CCAGCCACGCATCTCTGCCCGTTGGCTGCCGGATGAGATCCAAGTGGCAT
TGCTCGCGATCCGCGAGTATGGAAAAAACTTTCCTACGATTGCCAAGGTG
GTGGCCACCAAAACGGAGGCGCACGTGCGCACCTTTTACTTAAACAATCG
GCGCCGCTACAATCTCGACCAGATCGTAAAGGAGTACGAGGCTGGCAAGT
CCGAGGAGTCGGGCGCAGAGGAGCAGACCGAGCCTGCTGTCGACGCAGCC
GCGGCTGGCGCCGCAACAGCATCTGCGCCCAGCGCGGCTGATTCTACATC
CGCCGCGAGCGCGACAGCAGACAGGAAACAGTCCACCGAAAACAGCAACA
ACGGAGTTGAGACCATGCAGGAATCGTTGCCCAAGAAGGAGGACCCTAAG
AAGCCGGAGCTGGCAGCGGCTGTGCTCAAGATTGGCGTGGCCGAGGCAGC
AGATGCCGTGGCCACTGTGGCATCCAGCACAGCCTCTGGCGTCATCGGTG
CCGCCACCTCCGCCAGCAAGCCCAGCACCAGTGCTACAATCACCATTATA
GATGAGTCTGACACGGCCACGAACTCGAGCAGCGACGTTGTCACCACTGG
ACTTGCCACATCCACCGGCTCGTCCGCACTGTCCAGCACAACTAGTGCGC
CCGCATCCAAAACGCAGACCAGCAGCGAGGAGTTGTCCGCTCAGAAATCC
AATCCCGCGAGCGGGATCGCAGCCATAGGTGCTGCAACGGGCGGTGGCCA
GACTGCCAACAGCTCTGGCAGCAAGCGGGATAGCTCTGTATTGCCCGTCG
CCGAGCAGCCGCCGGCGAAGAAAATCGCGCTCAGCACCGGAGGCGGAAGC
AGCGTCGCAGAGTTCCTGGCCAACGCAAGCTTTCTAGACCAT
BO34532.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:28:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CoRest-RJ | 1011 | CG42687-PJ | 1..1008 | 17..1024 | 5040 | 100 | Plus |
| CoRest-RI | 2475 | CG42687-PI | 1494..2472 | 46..1024 | 4895 | 100 | Plus |
| CoRest-RH | 2475 | CG42687-PH | 1494..2472 | 46..1024 | 4895 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:28:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CoRest-RJ | 2203 | CG42687-RJ | 54..1061 | 17..1024 | 5040 | 100 | Plus |
| CoRest-RI | 3255 | CG42687-RI | 2058..3036 | 46..1024 | 4895 | 100 | Plus |
| CoRest-RH | 3155 | CG42687-RH | 1958..2936 | 46..1024 | 4895 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:28:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 19528894..19529601 | 236..943 | 3540 | 100 | Plus |
| X | 23542271 | X | 19528635..19528823 | 47..235 | 945 | 100 | Plus |
| X | 23542271 | X | 19529673..19529754 | 943..1024 | 410 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 14:28:34 has no hits.
BO34532.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-10-29 16:46:05 Download gff for
BO34532.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CoRest-RJ | 54..1061 | 17..1026 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:14:46 Download gff for
BO34532.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CoRest-RJ | 54..1061 | 17..1026 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:14:46 Download gff for
BO34532.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 19528415..19528444 | 17..46 | 100 | -> | Plus |
| X | 19528635..19528823 | 47..235 | 100 | -> | Plus |
| X | 19528894..19529601 | 236..943 | 100 | -> | Plus |
| X | 19529674..19529754 | 944..1026 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-10-29 16:46:05 Download gff for
BO34532.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 19422448..19422477 | 17..46 | 100 | -> | Plus |
| arm_X | 19422668..19422856 | 47..235 | 100 | -> | Plus |
| arm_X | 19422927..19423634 | 236..943 | 100 | -> | Plus |
| arm_X | 19423707..19423787 | 944..1026 | 97 | | Plus |
BO34532.pep Sequence
Translation from 16 to 1042
> BO34532.pep
MDEIFSLYCTIQKNRQVMEQLDKECETINVDDVLSKPAAANTESAQPRIS
ARWLPDEIQVALLAIREYGKNFPTIAKVVATKTEAHVRTFYLNNRRRYNL
DQIVKEYEAGKSEESGAEEQTEPAVDAAAAGAATASAPSAADSTSAASAT
ADRKQSTENSNNGVETMQESLPKKEDPKKPELAAAVLKIGVAEAADAVAT
VASSTASGVIGAATSASKPSTSATITIIDESDTATNSSSDVVTTGLATST
GSSALSSTTSAPASKTQTSSEELSAQKSNPASGIAAIGAATGGGQTANSS
GSKRDSSVLPVAEQPPAKKIALSTGGGSSVAEFLANASFLDH
BO34532.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:53:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CoRest-PJ | 336 | CG42687-PJ | 1..336 | 1..336 | 1633 | 100 | Plus |
| CoRest-PI | 824 | CG42687-PI | 491..824 | 3..336 | 1582 | 97.9 | Plus |
| CoRest-PH | 824 | CG42687-PH | 491..824 | 3..336 | 1582 | 97.9 | Plus |
| CoRest-PF | 590 | CG42687-PF | 265..590 | 11..336 | 1578 | 100 | Plus |
| CoRest-PE | 588 | CG33525-PE | 264..588 | 12..336 | 1570 | 99.7 | Plus |
