Clone BO34542 Report

Search the DGRC for BO34542

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:345
Well:42
Vector:pDNR-Dual
Associated Gene/TranscriptCG43797-RA
Protein status:BO34542.pep: Imported from assembly
Sequenced Size:730

Clone Sequence Records

BO34542.complete Sequence

730 bp assembled on 2013-10-29

GenBank Submission: KX794896

> BO34542.complete
GAAGTTATCAGTCGACATGTTCAAGTTGGGAACATATTATTTCTGCATTA
TCGTCACATTTCACGCGTATGGAATAGTTAGTCCTCAGGATGAAAAAGAT
TCAGAGTGCGTCCTGACGGATGCGCCCAATCAATGTGGGGCATTCTGTAT
GTCCGCTCAAAGGCCACTCTTCGAACACAATCGCATTATTCAGAATCAAA
TATATGAAATTAGTTCACTACAAGCTGAAAGTCACGAGAGACTTAAAAGA
ATCGAAAACGAATTAATAAATTTACAAATCGAACAAAAGGAAAGTAAGCA
AGCAATTAATGAAAATGACGATACAAAAGTTGAAGGAATCGAAACTACGA
CAAGTGTCAATCTAATTAAAAAAAAGAAATACGTCATTGTTGATAAGGCA
CTAAATTGGTATAATGCTGTAAAGTTCTGCCAAGAAATTGGAGGCAAACT
AGCTGAATTCAGTGATGAACATGAGTACGACACTGTCATATCAACAGTTG
AACCTGATACTTGTTACTGGATTGGCATTCGCAGTTATAATAACGAACAT
CAATCTTTGCGTACTGACAATCGCCCATTATATCTTAAAATGGCTGATAT
GCCAAACAACAATATTTTTAATGGTGAAAATTGTGTTGGTATTCAAAACG
GTTTTATGCATGACCTTTGGTGCAATTTAAGCTATTACTCTATTTGCACA
ACTAGTTGGTTTGCAAGCTTTCTAGACCAT

BO34542.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:29:05
Subject Length Description Subject Range Query Range Score Percent Strand
CG43797-RA 699 CG43797-PA 1..696 17..712 3480 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:29:05
Subject Length Description Subject Range Query Range Score Percent Strand
CG43797-RA 789 CG43797-RA 25..720 17..712 3480 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:29:02
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 4000042..4000737 17..712 3480 100 Plus
Blast to na_te.dros performed on 2014-11-28 14:29:03 has no hits.

BO34542.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-10-29 16:46:19 Download gff for BO34542.complete
Subject Subject Range Query Range Percent Splice Strand
CG43797-RA 30..720 22..714 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:14:57 Download gff for BO34542.complete
Subject Subject Range Query Range Percent Splice Strand
CG43797-RA 30..720 22..714 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:14:57 Download gff for BO34542.complete
Subject Subject Range Query Range Percent Splice Strand
2L 4000047..4000737 22..714 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-10-29 16:46:19 Download gff for BO34542.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 4000047..4000737 22..714 99   Plus

BO34542.pep Sequence

Translation from 16 to 730

> BO34542.pep
MFKLGTYYFCIIVTFHAYGIVSPQDEKDSECVLTDAPNQCGAFCMSAQRP
LFEHNRIIQNQIYEISSLQAESHERLKRIENELINLQIEQKESKQAINEN
DDTKVEGIETTTSVNLIKKKKYVIVDKALNWYNAVKFCQEIGGKLAEFSD
EHEYDTVISTVEPDTCYWIGIRSYNNEHQSLRTDNRPLYLKMADMPNNNI
FNGENCVGIQNGFMHDLWCNLSYYSICTTSWFASFLDH

BO34542.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:53:23
Subject Length Description Subject Range Query Range Score Percent Strand
CG43797-PA 232 CG43797-PA 1..232 1..232 1254 100 Plus
lectin-22C-PB 263 CG42295-PB 1..256 1..229 243 26.9 Plus
CG15358-PC 229 CG15358-PC 3..221 29..227 199 26.8 Plus
CG15358-PB 229 CG15358-PB 3..221 29..227 199 26.8 Plus
lectin-28C-PC 265 CG7106-PC 5..259 3..227 182 26.4 Plus