BO34542.complete Sequence
730 bp assembled on 2013-10-29
GenBank Submission: KX794896
> BO34542.complete
GAAGTTATCAGTCGACATGTTCAAGTTGGGAACATATTATTTCTGCATTA
TCGTCACATTTCACGCGTATGGAATAGTTAGTCCTCAGGATGAAAAAGAT
TCAGAGTGCGTCCTGACGGATGCGCCCAATCAATGTGGGGCATTCTGTAT
GTCCGCTCAAAGGCCACTCTTCGAACACAATCGCATTATTCAGAATCAAA
TATATGAAATTAGTTCACTACAAGCTGAAAGTCACGAGAGACTTAAAAGA
ATCGAAAACGAATTAATAAATTTACAAATCGAACAAAAGGAAAGTAAGCA
AGCAATTAATGAAAATGACGATACAAAAGTTGAAGGAATCGAAACTACGA
CAAGTGTCAATCTAATTAAAAAAAAGAAATACGTCATTGTTGATAAGGCA
CTAAATTGGTATAATGCTGTAAAGTTCTGCCAAGAAATTGGAGGCAAACT
AGCTGAATTCAGTGATGAACATGAGTACGACACTGTCATATCAACAGTTG
AACCTGATACTTGTTACTGGATTGGCATTCGCAGTTATAATAACGAACAT
CAATCTTTGCGTACTGACAATCGCCCATTATATCTTAAAATGGCTGATAT
GCCAAACAACAATATTTTTAATGGTGAAAATTGTGTTGGTATTCAAAACG
GTTTTATGCATGACCTTTGGTGCAATTTAAGCTATTACTCTATTTGCACA
ACTAGTTGGTTTGCAAGCTTTCTAGACCAT
BO34542.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:29:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG43797-RA | 699 | CG43797-PA | 1..696 | 17..712 | 3480 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:29:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG43797-RA | 789 | CG43797-RA | 25..720 | 17..712 | 3480 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:29:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 4000042..4000737 | 17..712 | 3480 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 14:29:03 has no hits.
BO34542.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-10-29 16:46:19 Download gff for
BO34542.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43797-RA | 30..720 | 22..714 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:14:57 Download gff for
BO34542.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43797-RA | 30..720 | 22..714 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:14:57 Download gff for
BO34542.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 4000047..4000737 | 22..714 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-10-29 16:46:19 Download gff for
BO34542.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 4000047..4000737 | 22..714 | 99 | | Plus |
BO34542.pep Sequence
Translation from 16 to 730
> BO34542.pep
MFKLGTYYFCIIVTFHAYGIVSPQDEKDSECVLTDAPNQCGAFCMSAQRP
LFEHNRIIQNQIYEISSLQAESHERLKRIENELINLQIEQKESKQAINEN
DDTKVEGIETTTSVNLIKKKKYVIVDKALNWYNAVKFCQEIGGKLAEFSD
EHEYDTVISTVEPDTCYWIGIRSYNNEHQSLRTDNRPLYLKMADMPNNNI
FNGENCVGIQNGFMHDLWCNLSYYSICTTSWFASFLDH
BO34542.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:53:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG43797-PA | 232 | CG43797-PA | 1..232 | 1..232 | 1254 | 100 | Plus |
lectin-22C-PB | 263 | CG42295-PB | 1..256 | 1..229 | 243 | 26.9 | Plus |
CG15358-PC | 229 | CG15358-PC | 3..221 | 29..227 | 199 | 26.8 | Plus |
CG15358-PB | 229 | CG15358-PB | 3..221 | 29..227 | 199 | 26.8 | Plus |
lectin-28C-PC | 265 | CG7106-PC | 5..259 | 3..227 | 182 | 26.4 | Plus |