BO34543.complete Sequence
1042 bp assembled on 2013-10-29
GenBank Submission: KX794565
> BO34543.complete
GAAGTTATCAGTCGACATGTGCATCCACTGCTGTCGCCTCCGCCGGACAC
CATGTCCACCGATTCCCTACAGCTGTCCACACTGCCCGGTGCGCACCATC
TCCAGCTGCTGTCCACTGGGCAGTCGGCCCCTCGCCGAGAATCCTTTCAT
AAGAGGTCCGGATCGGGAGCCAACCCCCGATCCCTGCGACACCTTGCCAC
CGCGCTGGCTGGACCTCAATCGACGGGTCATATTTGCCTTGGCAAAAAGA
TTATGTCGATCTCCAGAGGCAGCTCATTATATTTTGCTTCGCCTGTTGTA
TGCCAACTATAGAAAAGTGATGATGATATCCAGAAAACGAAGGAGATACA
AGGTGCCACTAAGTGGGTTTCCCGATCAGGATTTGTTCTCCGCCAGCGCA
CATTTCGATAGCAATGGTTACCTCTCCGATCCCATGGCTCCCGAAACTCT
GGGAAAGCTACTCCACATGATGCAGGACTACATCCTTCGGCTGAGAGCGC
TGAATCGCAAGTACAAGTGGTGTGGCAACGGCGAGGACTTTGGAGATGTA
TTGCTCCTATTGGGAGAGCAAGACGAACTGGTACGATTGTTAAGAGATCT
CTTTGGAGACAGCGATGTTGTGTCCATTCCAAAGCTCCTGAGCGCCCTTA
GCGAGCTGGAAATCAATAATTTATACGGAAAGTACAAGAAGAAAACAGTT
CCCTTTATGGTGAGAAGTATATCTGATCTCTACTCCGAAGTGACGGAACC
AAAGAGTCCAGTTTTGATATCATTAGCGCACATAGCCAACAAAGGAGTTT
CCCCTTATGGACCGAGCCACTTGAAAAACATCTTGAATTTCAGTCCAAAG
TCCTTGCCTATGATGGGTAAACACCCACCGCCTAAAAGAAGTAAAAGTGA
AAAATGCATTCCAACATCAAAAACGAATTTAACCCAAGCAGTACAAAATA
CCCAAAAAAAATCGAATTTCAAGGAACCAGCAGACAGTACTGGGATTTTA
AGTCCAACTTCCAAGAACTTACAAGCAAGCTTTCTAGACCAT
BO34543.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:29:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34216-RB | 1011 | CG34216-PB | 1..1008 | 17..1024 | 5040 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:29:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34216-RB | 1590 | CG34216-RB | 159..1166 | 17..1024 | 5040 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:29:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 7703930..7704937 | 1024..17 | 5040 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 14:29:07 has no hits.
BO34543.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-10-29 16:46:20 Download gff for
BO34543.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34216-RB | 159..1166 | 17..1026 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:14:59 Download gff for
BO34543.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34216-RB | 159..1166 | 17..1026 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:14:59 Download gff for
BO34543.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 7703928..7704937 | 17..1026 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-10-29 16:46:20 Download gff for
BO34543.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 3591433..3592442 | 17..1026 | 99 | | Minus |
BO34543.pep Sequence
Translation from 16 to 1042
> BO34543.pep
MCIHCCRLRRTPCPPIPYSCPHCPVRTISSCCPLGSRPLAENPFIRGPDR
EPTPDPCDTLPPRWLDLNRRVIFALAKRLCRSPEAAHYILLRLLYANYRK
VMMISRKRRRYKVPLSGFPDQDLFSASAHFDSNGYLSDPMAPETLGKLLH
MMQDYILRLRALNRKYKWCGNGEDFGDVLLLLGEQDELVRLLRDLFGDSD
VVSIPKLLSALSELEINNLYGKYKKKTVPFMVRSISDLYSEVTEPKSPVL
ISLAHIANKGVSPYGPSHLKNILNFSPKSLPMMGKHPPPKRSKSEKCIPT
SKTNLTQAVQNTQKKSNFKEPADSTGILSPTSKNLQASFLDH
BO34543.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:53:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34216-PB | 336 | CG34216-PB | 1..336 | 1..336 | 1794 | 100 | Plus |