BO34554.complete Sequence
733 bp assembled on 2013-10-29
GenBank Submission: KX796914
> BO34554.complete
GAAGTTATCAGTCGACATGATCTACGCAATTCTAGTGCTCTGTCTGCTGG
GCAGTTGTTGCCCAGCAATGGCCCAGAAGGTCGAAAAGGATCCGCTGGCC
AAGGAACAAAATACCCGTTTGGCCGGCATCTATGTGAAGGATGGCAACGA
AAATGGCCAGCTGAGATTCCTGGCATCGGGCTTGAACAGTGGCAGCAGCA
GCACCAGCTCTTCAAACACCGGTATCAACTCGGCCCTGAATCAGTACATA
ACCAATAAGCAGGATATGCTGGAGCAACTGCGTCCCACTTCGGGCACCAC
ATCAACGGGAACGGGAGCTGTTACGGGCACATCGACGGGAACAACAGGAA
CGACTTCGGGAACCGGAACTGGCCTGGTCACCACGACTTCCAATGGAGCT
ATCTATGTGAACCTGGGCAGTTCGGGATCCTCATCATCATCGTCTTCCTC
CTCGTCGGCCACCAATGCGGCCATTAATCAGGTCATCTATGGATCCTCGC
CAGTTGCCGGTCTCTTGCCGCAGATCGTTGGCCAGGCGGTGTCCAGTCGA
GTGCGTCCCGGTGGCCAGAACAATAGGAGGCGCGTTCCCGCCCGTAGGCG
CCGGGTCAACAAGAGGCGTGGCAGCATTAACAACAACAATCAGCGACGTC
GCCGGCGTGGCAACAAGCGGGGCAAGAATAAGGCCCAGGTGATGGTGGTG
CGACCAAATCGCGGTGCAAGCTTTCTAGACCAT
BO34554.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:11:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG4116-RB | 702 | CG4116-PB | 1..699 | 17..715 | 3495 | 100 | Plus |
CG4116-RA | 795 | CG4116-PA | 94..792 | 17..715 | 3495 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:11:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG4116-RB | 868 | CG4116-RB | 14..712 | 17..715 | 3495 | 100 | Plus |
CG4116-RA | 948 | CG4116-RA | 94..792 | 17..715 | 3495 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:11:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 3066771..3067469 | 715..17 | 3495 | 100 | Minus |
Blast to na_te.dros performed 2014-11-28 14:11:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6840..7049 | 185..384 | 134 | 55.9 | Plus |
BO34554.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-10-29 16:45:02 Download gff for
BO34554.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4116-RA | 94..792 | 17..717 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:42:55 Download gff for
BO34554.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4116-RA | 94..792 | 17..717 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:42:55 Download gff for
BO34554.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 3066768..3067469 | 17..717 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-10-29 16:45:02 Download gff for
BO34554.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 2960801..2961502 | 17..717 | 99 | | Minus |
BO34554.pep Sequence
Translation from 16 to 733
> BO34554.pep
MIYAILVLCLLGSCCPAMAQKVEKDPLAKEQNTRLAGIYVKDGNENGQLR
FLASGLNSGSSSTSSSNTGINSALNQYITNKQDMLEQLRPTSGTTSTGTG
AVTGTSTGTTGTTSGTGTGLVTTTSNGAIYVNLGSSGSSSSSSSSSSATN
AAINQVIYGSSPVAGLLPQIVGQAVSSRVRPGGQNNRRRVPARRRRVNKR
RGSINNNNQRRRRRGNKRGKNKAQVMVVRPNRGASFLDH
BO34554.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:51:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG4116-PB | 233 | CG4116-PB | 1..233 | 1..233 | 1167 | 100 | Plus |
CG4116-PA | 264 | CG4116-PA | 32..264 | 1..233 | 1167 | 100 | Plus |
CG13560-PB | 181 | CG13560-PB | 20..181 | 53..215 | 176 | 32.1 | Plus |
CG13560-PA | 181 | CG13560-PA | 20..181 | 53..215 | 176 | 32.1 | Plus |