Clone BO34558 Report

Search the DGRC for BO34558

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:345
Well:58
Vector:pDNR-Dual
Associated Gene/TranscriptCG13175-RA
Protein status:BO34558.pep: Imported from assembly
Sequenced Size:457

Clone Sequence Records

BO34558.complete Sequence

457 bp assembled on 2014-07-30

GenBank Submission: KX796279

> BO34558.complete
GAAGTTATCAGTCGACATGACAAGTCCGTCGCGGGATATAAACGATCTTT
TTGACGATATTGTCCTGACCGAGGAGAAGGAGGCACGTTTGGGCTACGAG
GAGGGACTGAAGGACGGCCAGGAGCAGGGCAACGAAGAGGGCTATAAATT
GGGCTACGCCCAGGGAGTATCCCTAGGCGAGGAGCTCGGCAAGATTCTGG
GCCAGGTGGTGGCCCAGCAGCAGCTGAAACACACGGACAAGGTGCGTCGC
AGCTTGGAACAGTTGCGTTCGCTCATCGAGGAGTTTCCCCGCACCAACGA
TCCGCAGGCGGACATAGTGGGTGCTGTGCAGGACATTCGCTCCTCCCATC
GTCGCCTTCGCGCCCAGCTGGGATCCAAAAAAACGCCTGGTGCAGCGCCT
GCAGAGACCAATTCTGTCGAGCACAAGGACTACAGCTTCGCAAGCTTTCT
AGACCAT

BO34558.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 15:14:29
Subject Length Description Subject Range Query Range Score Percent Strand
CG13175-RA 426 CG13175-PA 1..423 17..439 2115 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:14:30
Subject Length Description Subject Range Query Range Score Percent Strand
CG33964-RA 2245 CG33964-RA 158..580 17..439 2115 100 Plus
CG13175-RA 2245 CG13175-RA 158..580 17..439 2115 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 15:14:27
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 12182796..12183218 17..439 2115 100 Plus
Blast to na_te.dros performed on 2014-11-28 15:14:28 has no hits.

BO34558.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-07-30 15:44:44 Download gff for BO34558.complete
Subject Subject Range Query Range Percent Splice Strand
CG13175-RA 158..580 17..441 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:34:28 Download gff for BO34558.complete
Subject Subject Range Query Range Percent Splice Strand
CG13175-RA 158..580 17..441 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:34:28 Download gff for BO34558.complete
Subject Subject Range Query Range Percent Splice Strand
2R 12182796..12183218 17..441 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2014-07-30 15:44:44 Download gff for BO34558.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 8070301..8070723 17..441 99   Plus

BO34558.pep Sequence

Translation from 16 to 457

> BO34558.pep
MTSPSRDINDLFDDIVLTEEKEARLGYEEGLKDGQEQGNEEGYKLGYAQG
VSLGEELGKILGQVVAQQQLKHTDKVRRSLEQLRSLIEEFPRTNDPQADI
VGAVQDIRSSHRRLRAQLGSKKTPGAAPAETNSVEHKDYSFASFLDH

BO34558.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 10:10:50
Subject Length Description Subject Range Query Range Score Percent Strand
CG13175-PA 141 CG13175-PA 1..141 1..141 715 100 Plus