BO34561.complete Sequence
2413 bp assembled on 2014-03-03
GenBank Submission: KX799057
> BO34561.complete
GAAGTTATCAGTCGACATGGAACCCAAGAAGTTTCGGCTAGACCGTGGAC
CCTACCTTTCCCAGCTGGACTACCAATCTCGTCTGCAGTTCCAAGCACCA
GCTCTGAGGTTACCCCTTACCAGCATTATATGCACCATTGGACCCTCATC
CAGCCAGCCCGAGGTTCTTCTTAATCTCATTCACGCTGGGATGAAGGTGG
TCCGATTGGACTTCTCCGACGGCACCCACGATTGCCATTGCCAGGCTATC
CAGGCGGCTCGTAAAGCCATCGCCATGTATGCGGAGGAAACGGGTCTTCC
CAGGAGCTTGGCCATTGCCCTGGACACCAAGGGTCCGGTAATCAATCCAC
AGGGTGTAGCTGCTGATTTAAACGCCATAACCGAACAAGACAAACTGGAT
CTCAAGTTTGGAGCGGATCAAAAGGTTGACATGATCTTCGCATCGTTCAT
CCGCGATGCCAAAGCTTTGAAAGAAATTCGCCAGGCACTGGGTGCCTGTC
CATCAAGTGAGCACATAAAGATCATTTCCAAGATCGAAAGTCAACAGGCT
CTGGCGAACATAGATGAGATAATCCGCGAATCCGATGGCATAATGGTGGC
CCTTGGGAATATGGGCAACGAAATAGCACTGGAGGCTGTACCGCTGGCCC
AGAAATCGATTGTGGCCAAGTGCAACAAGGTTGGAAAGCCTGTGATCTGT
GCCAATCAAATGATGAATTCGATGATAACCAAGCCACGTCCCACTCGCGC
CGAATCCTCTGATGTGGCAAACGCAATCTTGGATGGTTGTGATGCCCTTG
TGTTGTCAGATGAAACGGCCAAGGGTAAGTACCCGGTGCAATGTGTGCAG
TGCATGGCCAGAATATGCGCCAAAGTCGAGTCGGTTTTATGGTACGAGAG
CATTCAGAACAACCTCAAGAGCGAAGTCCGGATCAACGCCGCCGATCACA
TCTCGGCGGTAAGCACGGCAATTGCAGAAGCGGCAACGGTGAGTCAGGCT
CAGGCAATAGTGGTGGCCAGTCCGTGCTCCATTGTGTCCCAGATGGTCAG
TCAAATGAGGCCGCCGTGTCCTATCGTGTTGCTCACAGGCTGCCCACATG
AGGCCGCTCAATCCTTGCTTTTTCGTGGCGTTTATCCACTCCTTGTCAAG
GAAATGGTTTATGGCAGCGTAAACTACTGTCGCATCATGCAATCGGGCTT
AAAGATATTGGCCAAGTTGGACATCCTGAAGGCAGGCCAAAGGGGAACTT
TGGTGCTGGTCAATGCCATGTCGGCAGACAAGCTCACCTTCAGGCTGTTC
ACTTTTGCACAGCCAACTGAGGCAGAGCGAGAAGAAGAACGCTGCCGAAA
GTTGGCCAGGAAGCAGCGATGCAAGGAAATGTCTGTAAATAAATCCTGTC
CAAATCCAAAGAGCAGTAAGTCTGAAATATCTATAAAGTCCGATGAAAAA
GATGGTACCAGTTCAAAGAAAGAATTTCCTAAGGACGAAGAAGTTTCGAA
ATGTTTACAACTAGAAAATGAAATTCAGCAGAAACGGGGTGAAGATTCTG
TAATGAACAAAGAAAATGAAAATCTCTGCCACAACGTGGCATTGAAGTGC
TTACATTTGAAGAATGAAAGACAAGCTCAATCGGAAGCTATGATGAAACA
GACGGAAAAACTTAAAAAAGCGGAAGATCCTAGAAAAAACAATGGGACCC
TTAAGGATAGTTTTAACCGTAAGAAAAAAGACGATAAAACCTCGAAGTCC
GATAAAAAGGATGGTTCCAGCTCAAAGAAAGATCGTCCTAACCACAAGGA
AGTCTGGAAATGTTTACAGCGGAGTCAAGATTTGGTAATGGCAGAAGAAA
ATGAATATCTCTGTTCAAAAAAATCAAAAGAATGTCCCAATAAGGACGAC
GAGGCCTTGAAGTGCTTACAGCTGAAAAAACAAAGACAAGCTCGAGCGGA
AGCTGAGATGAAAAAGAAGGCAGAACTAAAAAAAAATAATAGTTTAAGCC
ATAAGAAAGAAGACGATAAAGCACCAAACTGCAACAAACTTAAAAAACAA
GGCCCAAAGAAGAATAAGTGCAGAGTAGTCAAAATTTCGAGGACATCCGA
AAAGGATAATTATATTCCGAAGAAAGAATATCCTAGGATCTTCAATATAG
AAAAGGCTCAGCCAAAAACTGTGGTCAAACACAGTAAAGAGTTGGCAAAG
TCCTGCGATATTGTACTCGAAAACTGCAAGACCGTAAAACGCAAAAACTG
CAAGACTGTAAAATTAGAAAAATGTAAGACAGTAAAACTTGAAAACTGCA
AAATAACAAAACTTAAGAAGTGCAAAACGATCAAGCTCGAAAATTGTAAG
CAGCCGCGAAGAGTTAGGCAAAGAACTAATCTTACTAAAAAGGCGGCAAG
CTTTCTAGACCAT
BO34561.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:58:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7362-RB | 2382 | CG7362-PB | 1..2379 | 17..2395 | 11895 | 100 | Plus |
| CG7069-RA | 2235 | CG7069-PA | 480..1380 | 397..1303 | 1575 | 78.5 | Plus |
| CG7069-RA | 2235 | CG7069-PA | 20..146 | 210..336 | 320 | 83.5 | Plus |
| PyK-RA | 1602 | CG7070-PA | 958..1147 | 671..860 | 290 | 76.8 | Plus |
| CG7362-RB | 2382 | CG7362-PB | 1568..1653 | 1899..1984 | 190 | 81.4 | Plus |
| CG7362-RB | 2382 | CG7362-PB | 1883..1968 | 1584..1669 | 190 | 81.4 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:58:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7362-RB | 2654 | CG7362-RB | 145..2523 | 17..2395 | 11895 | 100 | Plus |
| CG7069-RA | 2693 | CG7069-RA | 830..1730 | 397..1303 | 1575 | 78.5 | Plus |
| CG7069-RA | 2693 | CG7069-RA | 188..496 | 28..336 | 525 | 78 | Plus |
| PyK-RA | 2109 | CG7070-RA | 1200..1389 | 671..860 | 290 | 76.8 | Plus |
| CG7362-RB | 2654 | CG7362-RB | 1712..1797 | 1899..1984 | 190 | 81.4 | Plus |
| CG7362-RB | 2654 | CG7362-RB | 2027..2112 | 1584..1669 | 190 | 81.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:58:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 14751879..14754255 | 2395..19 | 11885 | 100 | Minus |
| 3R | 32079331 | 3R | 22373716..22374616 | 397..1303 | 1575 | 78.5 | Plus |
| 3R | 32079331 | 3R | 22373074..22373382 | 28..336 | 525 | 78 | Plus |
| 3R | 32079331 | 3R | 22371693..22371882 | 671..860 | 290 | 76.8 | Plus |
| 3R | 32079331 | 3R | 14752605..14752690 | 1984..1899 | 190 | 81.4 | Minus |
| 3R | 32079331 | 3R | 14752290..14752375 | 1669..1584 | 190 | 81.4 | Minus |
Blast to na_te.dros performed on 2014-11-28 14:58:21 has no hits.
BO34561.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-03-03 17:23:35 Download gff for
BO34561.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7362-RB | 145..2523 | 17..2397 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:28:09 Download gff for
BO34561.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7362-RB | 145..2523 | 17..2397 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:28:09 Download gff for
BO34561.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 14751876..14754256 | 17..2397 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-03-03 17:23:35 Download gff for
BO34561.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 10577598..10579978 | 17..2397 | 99 | | Minus |
BO34561.pep Sequence
Translation from 16 to 2413
> BO34561.pep
MEPKKFRLDRGPYLSQLDYQSRLQFQAPALRLPLTSIICTIGPSSSQPEV
LLNLIHAGMKVVRLDFSDGTHDCHCQAIQAARKAIAMYAEETGLPRSLAI
ALDTKGPVINPQGVAADLNAITEQDKLDLKFGADQKVDMIFASFIRDAKA
LKEIRQALGACPSSEHIKIISKIESQQALANIDEIIRESDGIMVALGNMG
NEIALEAVPLAQKSIVAKCNKVGKPVICANQMMNSMITKPRPTRAESSDV
ANAILDGCDALVLSDETAKGKYPVQCVQCMARICAKVESVLWYESIQNNL
KSEVRINAADHISAVSTAIAEAATVSQAQAIVVASPCSIVSQMVSQMRPP
CPIVLLTGCPHEAAQSLLFRGVYPLLVKEMVYGSVNYCRIMQSGLKILAK
LDILKAGQRGTLVLVNAMSADKLTFRLFTFAQPTEAEREEERCRKLARKQ
RCKEMSVNKSCPNPKSSKSEISIKSDEKDGTSSKKEFPKDEEVSKCLQLE
NEIQQKRGEDSVMNKENENLCHNVALKCLHLKNERQAQSEAMMKQTEKLK
KAEDPRKNNGTLKDSFNRKKKDDKTSKSDKKDGSSSKKDRPNHKEVWKCL
QRSQDLVMAEENEYLCSKKSKECPNKDDEALKCLQLKKQRQARAEAEMKK
KAELKKNNSLSHKKEDDKAPNCNKLKKQGPKKNKCRVVKISRTSEKDNYI
PKKEYPRIFNIEKAQPKTVVKHSKELAKSCDIVLENCKTVKRKNCKTVKL
EKCKTVKLENCKITKLKKCKTIKLENCKQPRRVRQRTNLTKKAASFLDH
BO34561.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:58:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7362-PB | 793 | CG7362-PB | 1..793 | 1..793 | 4064 | 100 | Plus |
| CG7069-PA | 744 | CG7069-PA | 142..740 | 109..684 | 1445 | 53.2 | Plus |
| PyK-PB | 512 | CG7070-PB | 191..493 | 109..413 | 704 | 49.8 | Plus |
| PyK-PA | 533 | CG7070-PA | 212..514 | 109..413 | 704 | 49.8 | Plus |
| CG2964-PA | 554 | CG2964-PA | 194..458 | 108..376 | 527 | 41.3 | Plus |
| PyK-PB | 512 | CG7070-PB | 7..101 | 15..109 | 216 | 42.1 | Plus |
| PyK-PA | 533 | CG7070-PA | 28..122 | 15..109 | 216 | 42.1 | Plus |
| CG7069-PA | 744 | CG7069-PA | 1..70 | 59..132 | 209 | 58.1 | Plus |
