BO34562.complete Sequence
316 bp assembled on 2013-10-29
GenBank Submission: KX797066
> BO34562.complete
GAAGTTATCAGTCGACATGAAAAGCTATCTGCTGCTGGGCATATTATTAC
TATATTATCTGTGCATTGATGGACGGAGTGCTGAGATCAAAGAGGAAAGC
GACAATCCGAGCACAAATATACTTAGCACAACGCTTTCGAAAATTTCTCT
GCAGAACATAACCCGTCTCAATAGATCAAGTTTGGGTGGACGCGTACAAA
CTGATCACTTGGGAAGAAATCGGATTTACCATCGGAGAAGAGTTCAAACT
AGACGTCGAAGAACGAACAAAAATAAGCCCAAACATAAACATTCTCTAGC
AAGCTTTCTAGACCAT
BO34562.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:29:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG43448-RA | 285 | CG43448-PA | 1..282 | 17..298 | 1410 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:29:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG43448-RA | 529 | CG43448-RA | 5..296 | 7..298 | 1430 | 99.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:29:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 30237327..30237472 | 298..153 | 730 | 100 | Minus |
| 3R | 32079331 | 3R | 30237642..30237730 | 95..7 | 415 | 97.8 | Minus |
| 3R | 32079331 | 3R | 30237528..30237589 | 154..93 | 310 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 14:29:41 has no hits.
BO34562.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-10-29 16:46:31 Download gff for
BO34562.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG43448-RA | 15..296 | 17..300 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:15:14 Download gff for
BO34562.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG43448-RA | 15..296 | 17..300 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:15:14 Download gff for
BO34562.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 30237325..30237470 | 155..300 | 98 | <- | Minus |
| 3R | 30237528..30237587 | 95..154 | 100 | <- | Minus |
| 3R | 30237643..30237720 | 17..94 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-10-29 16:46:31 Download gff for
BO34562.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 26063047..26063192 | 155..300 | 98 | <- | Minus |
| arm_3R | 26063250..26063309 | 95..154 | 100 | <- | Minus |
| arm_3R | 26063365..26063442 | 17..94 | 100 | | Minus |
BO34562.pep Sequence
Translation from 16 to 316
> BO34562.pep
MKSYLLLGILLLYYLCIDGRSAEIKEESDNPSTNILSTTLSKISLQNITR
LNRSSLGGRVQTDHLGRNRIYHRRRVQTRRRRTNKNKPKHKHSLASFLDH
BO34562.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:53:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG43448-PA | 94 | CG43448-PA | 1..94 | 1..94 | 479 | 100 | Plus |
