BO34563.complete Sequence
655 bp assembled on 2013-10-29
GenBank Submission: KX796487
> BO34563.complete
GAAGTTATCAGTCGACATGAATGTCCATGGCGAGCCGGTTGTGAACGATA
AGAATTTGATGATCCCGCCGCAAAACTACAATGTAAAGTGCTTGTCTATG
GGCATGCTGACACCTGTAGAGACCTCTGTTATCTGGCGAGGTCCTCTTGT
AATGTCAGCAATACAACGACTGCTAAAAGGTACTGATTGGGGGCTTCTAG
ATGTCCTAGTTATAGATACTCCACCGGGCACTGGAGATGTACATCTCTCA
CTATCCCAGCATGCACCTATCACAGGGGTTATCCTGGTAACAACACCTCA
TACTGCAGCTGTTCAGGTGACCTTGAAAGGTGCAAGCATGTACGAAAAGT
TAAATGTTCCTATCTTTGGCGTAGTAGAGAACATGAAGTACACCATTTGT
CAGAACTGTAATCAACGATTGGAGTTTTTTAAAGACAGCCGTATAAGTTC
TCTACCGCGCAAGCTAATTTCTCTTCCGTTAGACTCACGAATAGCGGATA
GCAACGAGAGTGGAGTGCCTGTTGTAATAAAATATCCGGACAGCAAGTAC
TCTTATCTATTTACCCAATTGGCTGAGGAGATTACACAAATACTTAACGA
ACAAAGATGTAATCAAAATCAAAATAACAGTGCACATGCAAGCTTTCTAG
ACCAT
BO34563.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:29:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG3262-RE | 882 | CG3262-PE | 258..879 | 16..637 | 3095 | 99.8 | Plus |
CG3262-RD | 882 | CG3262-PD | 258..879 | 16..637 | 3095 | 99.8 | Plus |
CG3262-RF | 624 | CG3262-PF | 1..621 | 17..637 | 3090 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:29:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG3262-RF | 900 | CG3262-RF | 258..879 | 16..637 | 3095 | 99.8 | Plus |
CG3262-RE | 7023 | CG3262-RE | 274..895 | 16..637 | 3095 | 99.8 | Plus |
CG3262-RD | 1013 | CG3262-RD | 274..895 | 16..637 | 3095 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:29:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 22240239..22240860 | 16..637 | 3095 | 99.8 | Plus |
Blast to na_te.dros performed 2014-11-28 14:29:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
transib3 | 2883 | transib3 TRANSIB3 2883bp | 1498..1536 | 206..168 | 114 | 76.9 | Minus |
BO34563.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-10-29 16:46:33 Download gff for
BO34563.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3262-RD | 275..895 | 17..639 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:15:16 Download gff for
BO34563.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3262-RD | 275..895 | 17..639 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:15:16 Download gff for
BO34563.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 22240240..22240860 | 17..639 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-10-29 16:46:33 Download gff for
BO34563.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 22240240..22240860 | 17..639 | 99 | | Plus |
BO34563.pep Sequence
Translation from 16 to 655
> BO34563.pep
MNVHGEPVVNDKNLMIPPQNYNVKCLSMGMLTPVETSVIWRGPLVMSAIQ
RLLKGTDWGLLDVLVIDTPPGTGDVHLSLSQHAPITGVILVTTPHTAAVQ
VTLKGASMYEKLNVPIFGVVENMKYTICQNCNQRLEFFKDSRISSLPRKL
ISLPLDSRIADSNESGVPVVIKYPDSKYSYLFTQLAEEITQILNEQRCNQ
NQNNSAHASFLDH
BO34563.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:53:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG3262-PF | 207 | CG3262-PF | 1..207 | 1..207 | 1077 | 100 | Plus |
CG3262-PE | 293 | CG3262-PE | 87..293 | 1..207 | 1077 | 100 | Plus |
CG3262-PD | 293 | CG3262-PD | 87..293 | 1..207 | 1077 | 100 | Plus |
CG17904-PA | 311 | CG17904-PA | 127..285 | 22..166 | 229 | 35.8 | Plus |
CG4858-PA | 260 | CG4858-PA | 75..258 | 19..193 | 224 | 31 | Plus |