Clone BO34563 Report

Search the DGRC for BO34563

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:345
Well:63
Vector:pDNR-Dual
Associated Gene/TranscriptCG3262-RF
Protein status:BO34563.pep: Imported from assembly
Sequenced Size:655

Clone Sequence Records

BO34563.complete Sequence

655 bp assembled on 2013-10-29

GenBank Submission: KX796487

> BO34563.complete
GAAGTTATCAGTCGACATGAATGTCCATGGCGAGCCGGTTGTGAACGATA
AGAATTTGATGATCCCGCCGCAAAACTACAATGTAAAGTGCTTGTCTATG
GGCATGCTGACACCTGTAGAGACCTCTGTTATCTGGCGAGGTCCTCTTGT
AATGTCAGCAATACAACGACTGCTAAAAGGTACTGATTGGGGGCTTCTAG
ATGTCCTAGTTATAGATACTCCACCGGGCACTGGAGATGTACATCTCTCA
CTATCCCAGCATGCACCTATCACAGGGGTTATCCTGGTAACAACACCTCA
TACTGCAGCTGTTCAGGTGACCTTGAAAGGTGCAAGCATGTACGAAAAGT
TAAATGTTCCTATCTTTGGCGTAGTAGAGAACATGAAGTACACCATTTGT
CAGAACTGTAATCAACGATTGGAGTTTTTTAAAGACAGCCGTATAAGTTC
TCTACCGCGCAAGCTAATTTCTCTTCCGTTAGACTCACGAATAGCGGATA
GCAACGAGAGTGGAGTGCCTGTTGTAATAAAATATCCGGACAGCAAGTAC
TCTTATCTATTTACCCAATTGGCTGAGGAGATTACACAAATACTTAACGA
ACAAAGATGTAATCAAAATCAAAATAACAGTGCACATGCAAGCTTTCTAG
ACCAT

BO34563.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:29:47
Subject Length Description Subject Range Query Range Score Percent Strand
CG3262-RE 882 CG3262-PE 258..879 16..637 3095 99.8 Plus
CG3262-RD 882 CG3262-PD 258..879 16..637 3095 99.8 Plus
CG3262-RF 624 CG3262-PF 1..621 17..637 3090 99.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:29:48
Subject Length Description Subject Range Query Range Score Percent Strand
CG3262-RF 900 CG3262-RF 258..879 16..637 3095 99.8 Plus
CG3262-RE 7023 CG3262-RE 274..895 16..637 3095 99.8 Plus
CG3262-RD 1013 CG3262-RD 274..895 16..637 3095 99.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:29:45
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 22240239..22240860 16..637 3095 99.8 Plus
Blast to na_te.dros performed 2014-11-28 14:29:46
Subject Length Description Subject Range Query Range Score Percent Strand
transib3 2883 transib3 TRANSIB3 2883bp 1498..1536 206..168 114 76.9 Minus

BO34563.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-10-29 16:46:33 Download gff for BO34563.complete
Subject Subject Range Query Range Percent Splice Strand
CG3262-RD 275..895 17..639 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:15:16 Download gff for BO34563.complete
Subject Subject Range Query Range Percent Splice Strand
CG3262-RD 275..895 17..639 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:15:16 Download gff for BO34563.complete
Subject Subject Range Query Range Percent Splice Strand
2L 22240240..22240860 17..639 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-10-29 16:46:33 Download gff for BO34563.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 22240240..22240860 17..639 99   Plus

BO34563.pep Sequence

Translation from 16 to 655

> BO34563.pep
MNVHGEPVVNDKNLMIPPQNYNVKCLSMGMLTPVETSVIWRGPLVMSAIQ
RLLKGTDWGLLDVLVIDTPPGTGDVHLSLSQHAPITGVILVTTPHTAAVQ
VTLKGASMYEKLNVPIFGVVENMKYTICQNCNQRLEFFKDSRISSLPRKL
ISLPLDSRIADSNESGVPVVIKYPDSKYSYLFTQLAEEITQILNEQRCNQ
NQNNSAHASFLDH

BO34563.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:53:43
Subject Length Description Subject Range Query Range Score Percent Strand
CG3262-PF 207 CG3262-PF 1..207 1..207 1077 100 Plus
CG3262-PE 293 CG3262-PE 87..293 1..207 1077 100 Plus
CG3262-PD 293 CG3262-PD 87..293 1..207 1077 100 Plus
CG17904-PA 311 CG17904-PA 127..285 22..166 229 35.8 Plus
CG4858-PA 260 CG4858-PA 75..258 19..193 224 31 Plus