BO34566.complete Sequence
445 bp assembled on 2013-10-29
GenBank Submission: KX796090
> BO34566.complete
GAAGTTATCAGTCGACATGCTCAAGCTGGTGGATCGAAATGCCGGCGAAA
GGGCACAGTTGACCAGCGATGTGGCCACTTTGAGTGTGCGACTCGCCCAG
GCAAACTTCAACATCGCCAAGCTGCAGAGGGAAATCGAACGCTACAAGGC
CGACATTAGCCTGGCCATCCAATTGCTGCAGTGCAAGCCGGATAGTTTTG
TGTCCCAGAAAGTGTCATCGCTACCCATTGATATTCAGTCGAAGGTGTCG
GCGTACATGAGACTGGAGACGAACTCCCACTCCGATTCCGAGTGCAGCAA
TAGTGGAGTTGGCGTGGCCACCACAGCTTCCTACAAAGTGCTTCCGGCCT
CCGATTCGCCGCCCCCATCCGCCTGCCCCTTCCCGCCCACGGCCATGGTG
TATTCGATGAGGGGAATCGGTAGGTGTGCAAGCTTTCTAGACCAT
BO34566.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:29:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42324-RH | 414 | CG42324-PH | 1..411 | 17..427 | 2055 | 100 | Plus |
| CG42324-RF | 750 | CG42324-PF | 337..747 | 17..427 | 2055 | 100 | Plus |
| CG42324-RK | 3114 | CG42324-PK | 337..749 | 17..429 | 2050 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:29:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42324-RH | 982 | CG42324-RH | 350..760 | 17..427 | 2055 | 100 | Plus |
| CG42324-RF | 1209 | CG42324-RF | 577..987 | 17..427 | 2055 | 100 | Plus |
| CG42324-RK | 5716 | CG42324-RK | 577..989 | 17..429 | 2050 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:29:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 3504887..3505094 | 220..427 | 1040 | 100 | Plus |
| 3L | 28110227 | 3L | 3486159..3486279 | 17..137 | 605 | 100 | Plus |
| 3L | 28110227 | 3L | 3504720..3504803 | 137..220 | 420 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 14:29:50 has no hits.
BO34566.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-10-29 16:46:34 Download gff for
BO34566.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42324-RF | 577..987 | 17..429 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:15:17 Download gff for
BO34566.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42324-RF | 577..987 | 17..429 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:15:17 Download gff for
BO34566.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 3486159..3486278 | 17..136 | 100 | -> | Plus |
| 3L | 3504720..3504803 | 137..220 | 100 | -> | Plus |
| 3L | 3504888..3505094 | 221..429 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-10-29 16:46:34 Download gff for
BO34566.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 3486159..3486278 | 17..136 | 100 | -> | Plus |
| arm_3L | 3504720..3504803 | 137..220 | 100 | -> | Plus |
| arm_3L | 3504888..3505094 | 221..429 | 99 | | Plus |
BO34566.pep Sequence
Translation from 16 to 445
> BO34566.pep
MLKLVDRNAGERAQLTSDVATLSVRLAQANFNIAKLQREIERYKADISLA
IQLLQCKPDSFVSQKVSSLPIDIQSKVSAYMRLETNSHSDSECSNSGVGV
ATTASYKVLPASDSPPPSACPFPPTAMVYSMRGIGRCASFLDH
BO34566.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:53:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42324-PH | 137 | CG42324-PH | 1..137 | 1..137 | 688 | 100 | Plus |
| CG42324-PF | 249 | CG42324-PF | 113..249 | 1..137 | 688 | 100 | Plus |
| CG42324-PG | 925 | CG42324-PG | 1..139 | 1..139 | 682 | 98.6 | Plus |
| CG42324-PK | 1037 | CG42324-PK | 113..251 | 1..139 | 682 | 98.6 | Plus |
| CG42324-PI | 923 | CG42324-PI | 1..134 | 1..134 | 668 | 100 | Plus |
