Clone BO34567 Report

Search the DGRC for BO34567

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:345
Well:67
Vector:pDNR-Dual
Associated Gene/TranscriptmGluRA-RC
Protein status:BO34567.pep: Imported from assembly
Sequenced Size:1633

Clone Sequence Records

BO34567.complete Sequence

1633 bp assembled on 2014-03-03

GenBank Submission: KX794670

> BO34567.complete
GAAGTTATCAGTCGACATGAAACAGAAAAATAATAACGGAACAATTTTAG
TCGTCGTGATGGTTTTATCCTGGAGTCGAGTAGTAGACTTAAAAAGTCCT
AGTAACACACATACTCAGGATTCAGTGTCTGTTTCTCTGCCTGGCGACAT
TATACTTGGTGGGCTATTTCCGGTCCATGAAAAAGGTGAAGGTGCCCCTT
GCGGACCAAAAGTATATAATAGGGGAGTTCAACGCCTGGAAGCAATGCTG
TATGCTATAGATCGTGTAAACAATGACCCCAACATACTTCCTGGAATTAC
GATAGGAGTCCATATACTTGACACCTGTTCAAGAGACACATATGCCCTCA
ATCAGTCGCTTCAATTTGTCAGAGCATCCCTAAACAATTTAGACACATCA
GGATATGAGTGTGCAGATGGGTCAAGCCCGCAACTAAGAAAAAATGCTTC
GTCAGGCCCAGTTTTTGGAGTTATTGGCGGGTCCTACAGTTCAGTGTCCT
TGCAAGTGGCCAATTTGCTGCGTCTGTTTCATATTCCTCAAGTATCACCG
GCCTCAACCGCTAAAACGCTTTCGGACAAAACACGCTTTGATCTGTTTGC
TCGAACAGTACCTCCAGACACTTTCCAATCCGTAGCCCTCGTGGACATAC
TAAAAAACTTTAACTGGTCATACGTATCAACGATACATTCGGAAGGATCT
TATGGTGAATATGGGATTGAAGCATTACACAAGGAAGCTACCGAACGAAA
TGTTTGCATAGCGGTAGCCGAGAAAGTACCCAGTGCCGCAGACGACAAAG
TTTTCGATTCCATTATAAGCAAGCTTCAAAAGAAGCCTAACGCTCGCGGC
GTTGTTCTTTTTACGAGAGCTGAAGATGCGCGTCGAATTTTACAAGCAGC
TAAACGAGCTAACTTATCGCAACCATTTCATTGGATAGCAAGTGATGGTT
GGGGGAAACAACAAAAACTACTCGAAGGCTTAGAGGACATCGCTGAGGGT
GCAATAACTGTAGAACTGCAGTCAGAGATAATCGCAGATTTTGATCGCTA
CATGATGCAACTGACGCCAGAGACAAATCAAAGGAATCCTTGGTTTGCTG
AATACTGGGAAGATACATTCAACTGTGTTTTGACATCTCTTTCGGTAAAA
CCTGATACTTCAAACTCGGCTAATTCTACTGACAATAAAATCGGCGTCAA
AGCAAAAACAGAATGCGACGATAGTTACCGGTTATCTGAAAAAGTTGGAT
ACGAACAGGAGTCAAAGACACAATTTGTTGTGGATGCCGTCTACGCATTT
GCCTATGCACTTCATAATTTGCATAATGATCGTTGCAACACACAAAGCGA
CCAAACGACTGAGACAAGGAAGCACCTACAAAGCGAATCTGTGTGGTATC
GAAAAATTTCGACTGATACTAAGTCCCAAGCGTGTCCTGACATGGCTAAT
TATGACGGAAAGGAGTTTTACAACAATTACCTTTTGAACGTATCATTCAT
AGATCTTGCTGGCAGCGAAGTTAAATTCGATCGACAAGGCGATGGTTTGG
CCAGATACGACATTTTGAATTATCAACGGCAAGAAAACTCTTCAGGATAT
CAGTATAAGGTACCAGCAAGCTTTCTAGACCAT

BO34567.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:57:38
Subject Length Description Subject Range Query Range Score Percent Strand
mGluR-RC 1602 CG11144-PC 1..1599 17..1615 7995 100 Plus
mGluR-RB 2931 CG11144-PB 1..1595 17..1611 7975 100 Plus
mGluR-RA 2931 CG11144-PA 1..1595 17..1611 7975 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:57:40
Subject Length Description Subject Range Query Range Score Percent Strand
mGluR-RC 3019 CG11144-RC 210..1808 17..1615 7995 100 Plus
mGluR-RB 5961 CG11144-RB 210..1804 17..1611 7975 100 Plus
mGluR-RA 3345 CG11144-RA 210..1804 17..1611 7975 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:57:37
Subject Length Description Subject Range Query Range Score Percent Strand
4 1348131 4 938430..939121 17..708 3460 100 Plus
4 1348131 4 940173..940717 704..1248 2725 100 Plus
4 1348131 4 942766..943020 1248..1502 1275 100 Plus
3L 28110227 3L 27170264..27170565 403..708 1100 92.2 Plus
4 1348131 4 943099..943215 1499..1615 585 100 Plus
Blast to na_te.dros performed on 2014-11-28 14:57:38 has no hits.

BO34567.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-03-03 17:23:18 Download gff for BO34567.complete
Subject Subject Range Query Range Percent Splice Strand
mGluRA-RC 210..1808 17..1617 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:27:53 Download gff for BO34567.complete
Subject Subject Range Query Range Percent Splice Strand
mGluR-RC 210..1808 17..1617 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:27:53 Download gff for BO34567.complete
Subject Subject Range Query Range Percent Splice Strand
4 938430..939117 17..704 100 -> Plus
4 940174..940717 705..1248 100 -> Plus
4 942767..943020 1249..1502 100 -> Plus
4 943103..943215 1503..1617 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2014-03-03 17:23:18 Download gff for BO34567.complete
Subject Subject Range Query Range Percent Splice Strand
arm_4 959056..959743 17..704 100 -> Plus
arm_4 960800..961343 705..1248 100 -> Plus
arm_4 963393..963646 1249..1502 100 -> Plus
arm_4 963729..963841 1503..1617 98   Plus

BO34567.pep Sequence

Translation from 16 to 1633

> BO34567.pep
MKQKNNNGTILVVVMVLSWSRVVDLKSPSNTHTQDSVSVSLPGDIILGGL
FPVHEKGEGAPCGPKVYNRGVQRLEAMLYAIDRVNNDPNILPGITIGVHI
LDTCSRDTYALNQSLQFVRASLNNLDTSGYECADGSSPQLRKNASSGPVF
GVIGGSYSSVSLQVANLLRLFHIPQVSPASTAKTLSDKTRFDLFARTVPP
DTFQSVALVDILKNFNWSYVSTIHSEGSYGEYGIEALHKEATERNVCIAV
AEKVPSAADDKVFDSIISKLQKKPNARGVVLFTRAEDARRILQAAKRANL
SQPFHWIASDGWGKQQKLLEGLEDIAEGAITVELQSEIIADFDRYMMQLT
PETNQRNPWFAEYWEDTFNCVLTSLSVKPDTSNSANSTDNKIGVKAKTEC
DDSYRLSEKVGYEQESKTQFVVDAVYAFAYALHNLHNDRCNTQSDQTTET
RKHLQSESVWYRKISTDTKSQACPDMANYDGKEFYNNYLLNVSFIDLAGS
EVKFDRQGDGLARYDILNYQRQENSSGYQYKVPASFLDH

BO34567.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:57:54
Subject Length Description Subject Range Query Range Score Percent Strand
mGluR-PC 533 CG11144-PC 1..533 1..533 2774 100 Plus
mGluR-PB 976 CG11144-PB 1..532 1..532 2767 100 Plus
mGluR-PA 976 CG11144-PA 1..532 1..532 2767 100 Plus
mGluR-PD 308 CG11144-PD 1..229 1..229 1180 100 Plus
mtt-PE 1095 CG30361-PE 71..515 41..532 876 38.2 Plus