Clone BO34574 Report

Search the DGRC for BO34574

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:345
Well:74
Vector:pDNR-Dual
Associated Gene/TranscriptATPsyn-beta-RB
Protein status:BO34574.pep: Imported from assembly
Sequenced Size:415

Clone Sequence Records

BO34574.complete Sequence

415 bp assembled on 2013-10-29

GenBank Submission: KX793806

> BO34574.complete
GAAGTTATCAGTCGACATGTTCGCGTTACGTGCTGCATCTAAAGCCGATA
AGAATTTGCTGCCATTCTTGGGGCAATTGTCTCGTAGCCATGCTGCCAAG
GCTGCAAAGGCTGCAGCTGCCGCAAATGGAAAGATTGTGGCCGTAATTGG
TGCAGTCGTCGATGTCCAGTTTGATGATAACTTACCGCCCATTCTGAATG
CCTTGGAAGTAGACAACCGTTCTCCTCGGCTCGTGCTAGAGGTGGCCCAG
CACTTGGGAGAAAATACCGTGCGCACTATCGCCATGGATGGTACCGAAGG
CTTGGTTCGCGGACAGAAGGTTCTCGATACTGGGTATCCTATCCGAATTC
CAGTTGGTGCCGAAACACTAGGACGCATCATTAATGTTATTGGGAAGGCA
AGCTTTCTAGACCAT

BO34574.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:12:08
Subject Length Description Subject Range Query Range Score Percent Strand
ATPsyn-beta-RD 1518 CG11154-PD 1..377 17..393 1885 100 Plus
ATPsyn-beta-RA 1518 CG11154-PA 1..377 17..393 1885 100 Plus
ATPsyn-beta-RC 1536 CG11154-PC 1..395 17..393 1670 95.4 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:12:08
Subject Length Description Subject Range Query Range Score Percent Strand
ATPsyn-beta-RD 2048 CG11154-RD 27..403 17..393 1885 100 Plus
ATPsyn-beta-RA 1688 CG11154-RA 27..403 17..393 1885 100 Plus
ATPsyn-beta-RC 2026 CG11154-RC 347..741 17..393 1670 95.4 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:12:06
Subject Length Description Subject Range Query Range Score Percent Strand
4 1348131 4 1032907..1033223 81..397 1570 99.7 Plus
4 1348131 4 1031890..1031953 17..80 320 100 Plus
Blast to na_te.dros performed on 2014-11-28 14:12:07 has no hits.

BO34574.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-10-29 16:45:16 Download gff for BO34574.complete
Subject Subject Range Query Range Percent Splice Strand
ATPsyn-beta-RB 32..407 22..399 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:43:12 Download gff for BO34574.complete
Subject Subject Range Query Range Percent Splice Strand
ATPsyn-beta-RA 32..408 22..399 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:43:12 Download gff for BO34574.complete
Subject Subject Range Query Range Percent Splice Strand
4 1031895..1031953 22..80 100 -> Plus
4 1032907..1033223 81..399 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-10-29 16:45:16 Download gff for BO34574.complete
Subject Subject Range Query Range Percent Splice Strand
arm_4 1053533..1053849 81..399 99   Plus
arm_4 1052521..1052579 22..80 100 -> Plus

BO34574.pep Sequence

Translation from 16 to 415

> BO34574.pep
MFALRAASKADKNLLPFLGQLSRSHAAKAAKAAAAANGKIVAVIGAVVDV
QFDDNLPPILNALEVDNRSPRLVLEVAQHLGENTVRTIAMDGTEGLVRGQ
KVLDTGYPIRIPVGAETLGRIINVIGKASFLDH

BO34574.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:52:06
Subject Length Description Subject Range Query Range Score Percent Strand
ATPsyn-beta-PD 505 CG11154-PD 1..127 1..127 620 99.2 Plus
ATPsyn-beta-PA 505 CG11154-PA 1..127 1..127 620 99.2 Plus
ATPsyn-beta-PC 511 CG11154-PC 1..133 1..127 603 94.7 Plus
ms(3)72Dt-PA 622 CG5389-PA 104..193 38..126 267 62.2 Plus