BO34574.complete Sequence
415 bp assembled on 2013-10-29
GenBank Submission: KX793806
> BO34574.complete
GAAGTTATCAGTCGACATGTTCGCGTTACGTGCTGCATCTAAAGCCGATA
AGAATTTGCTGCCATTCTTGGGGCAATTGTCTCGTAGCCATGCTGCCAAG
GCTGCAAAGGCTGCAGCTGCCGCAAATGGAAAGATTGTGGCCGTAATTGG
TGCAGTCGTCGATGTCCAGTTTGATGATAACTTACCGCCCATTCTGAATG
CCTTGGAAGTAGACAACCGTTCTCCTCGGCTCGTGCTAGAGGTGGCCCAG
CACTTGGGAGAAAATACCGTGCGCACTATCGCCATGGATGGTACCGAAGG
CTTGGTTCGCGGACAGAAGGTTCTCGATACTGGGTATCCTATCCGAATTC
CAGTTGGTGCCGAAACACTAGGACGCATCATTAATGTTATTGGGAAGGCA
AGCTTTCTAGACCAT
BO34574.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:12:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
ATPsyn-beta-RD | 1518 | CG11154-PD | 1..377 | 17..393 | 1885 | 100 | Plus |
ATPsyn-beta-RA | 1518 | CG11154-PA | 1..377 | 17..393 | 1885 | 100 | Plus |
ATPsyn-beta-RC | 1536 | CG11154-PC | 1..395 | 17..393 | 1670 | 95.4 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:12:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
ATPsyn-beta-RD | 2048 | CG11154-RD | 27..403 | 17..393 | 1885 | 100 | Plus |
ATPsyn-beta-RA | 1688 | CG11154-RA | 27..403 | 17..393 | 1885 | 100 | Plus |
ATPsyn-beta-RC | 2026 | CG11154-RC | 347..741 | 17..393 | 1670 | 95.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:12:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
4 | 1348131 | 4 | 1032907..1033223 | 81..397 | 1570 | 99.7 | Plus |
4 | 1348131 | 4 | 1031890..1031953 | 17..80 | 320 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 14:12:07 has no hits.
BO34574.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-10-29 16:45:16 Download gff for
BO34574.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
ATPsyn-beta-RB | 32..407 | 22..399 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:43:12 Download gff for
BO34574.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
ATPsyn-beta-RA | 32..408 | 22..399 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:43:12 Download gff for
BO34574.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
4 | 1031895..1031953 | 22..80 | 100 | -> | Plus |
4 | 1032907..1033223 | 81..399 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-10-29 16:45:16 Download gff for
BO34574.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_4 | 1053533..1053849 | 81..399 | 99 | | Plus |
arm_4 | 1052521..1052579 | 22..80 | 100 | -> | Plus |
BO34574.pep Sequence
Translation from 16 to 415
> BO34574.pep
MFALRAASKADKNLLPFLGQLSRSHAAKAAKAAAAANGKIVAVIGAVVDV
QFDDNLPPILNALEVDNRSPRLVLEVAQHLGENTVRTIAMDGTEGLVRGQ
KVLDTGYPIRIPVGAETLGRIINVIGKASFLDH
BO34574.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:52:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
ATPsyn-beta-PD | 505 | CG11154-PD | 1..127 | 1..127 | 620 | 99.2 | Plus |
ATPsyn-beta-PA | 505 | CG11154-PA | 1..127 | 1..127 | 620 | 99.2 | Plus |
ATPsyn-beta-PC | 511 | CG11154-PC | 1..133 | 1..127 | 603 | 94.7 | Plus |
ms(3)72Dt-PA | 622 | CG5389-PA | 104..193 | 38..126 | 267 | 62.2 | Plus |