Clone BO34576 Report

Search the DGRC for BO34576

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:345
Well:76
Vector:pDNR-Dual
Associated Gene/Transcriptens-RH
Protein status:BO34576.pep: Imported from assembly
Sequenced Size:2578

Clone Sequence Records

BO34576.complete Sequence

2578 bp assembled on 2014-03-03

GenBank Submission: KX798038

> BO34576.complete
GAAGTTATCAGTCGACATGGCGAGTCTTGGGGGCCAACACGGAAATATTT
CGACTAATCCAGAAGTGGAAAACACAGCCAAGCGACCCGAAAGTCGCGAG
GGCAGCGCCGAGCGAAAAGACCGTGAGGAGAAACTAAAATATGCCCGCGA
TCGCCAAAATGAGGAGCGCCACCGGAAAATCGAGGAACTGCGTGCCCAGG
CGGAGGCCGCCCAGCGGTACCGTGAACAAAAGGAGGAGGAGCGCCGTCGA
CGCATCGAGGAGATCCGTACCCGGGACACAGAGAAGCGCCACCAGGTGGA
GGAGCGCAAGAAGGCCATTTTCGAGGCCGAGAAGGAGCGCCGCGAGTACA
TCCTCAAAAAGAATCAGGAACGCGAGTCCCGGATAGAAGTGAAAAAACGG
GACAGAAACTCCATCGGCTTCGCATTTGGCTCCTCGACTCCCCGCCTGCT
GGATGTGCCCGCGGATTATGGTCTGGTATCGCCCAGTGCCTTTTGGGGTC
AGCGGAGGTCCACATCTATATCGAACGTAGCGGGCGCCTCGCTCACACGT
CGAAGTTCAGAGCGTGAACTTGCCGACAGTGGTGCTAAGAAGCGTGCCTC
CTCATCGACGGACCGACAAGATGGCTCGCGATCGGGAAATGCCACGCCCG
GCGGACACTTCAATAACTCAAGGCCCGGCAGCGCCATGTCCACATCGACA
AACATGTCCACATCCGGGCTGGTGCCCAGGCGACCGGCAACGGCACCCCG
GAAACCGAGGCCCGCCAGTATCGCCGGAACGGGCATGTCTCTCGAGGAGA
TTAACAAACTCAAGAGGGATCAGAAGCCGCCCGTGAAGACGACAGCCGCC
TCGCCATCCGCACAAACGACACCCAAACGAACTGCAAACCTTATGTCCAC
CTCCCTGATCGTGACCTCCAGCTCATCGCGGCTGAGCAGCGCCGAAAAGA
AGACGCCTTCGAAGCGGGAACCTCCGGTACCCAAGGCAGCATCAGCTTCA
AAGGCGCTGCCAAGTCGCACAGCCAGTTCCGAGCGCATCAGTAGGCTTAC
CAAGGAACCGAAAACCAAGGATACCTCTGCAATGACTAGGTCGATGATTG
TCACCAGCAGCAGTACCTCCACCATCACAAAACCAGCTCCTGCCCCGGTC
GCACCCACATCCGCTCCAGTTCCCGAGCAGAACGGTGTGGCCAAGGAGGT
AGAGAAGACTACTGCAGATGAGCCAGTTCCTGAGGCTGAAGTTCCTACCG
AGGCTCCCGTTGTTGTTCCATCAGTGAGCAAGGCTGAGAAGGAAGCATTG
AACACGGAGAAAACGGAGGAAGGGGCGCGTCAGGAGGAGGAGCAAATTTT
AGCGGTGGAATCTGTGCCCGAAGCTTTGGTTACCTCAATTAATGTAGAGG
AAAAATCGGATGAGGGCAATGAGAAGGAGGTTCCTAAGCCCCAGGAGCAG
GCTGCGCCCAAGAAACCATCGCGCAGCAAGGAGAACTCAGAGGTGCGGGA
ACTGACCCCACCAGAGGGTGCTGATCTGATGACCGCTTCGATGATGGCCA
AGAAGATCACGACCGAGGAGGAGGCCAAGGCCGCTTTGGCCGAGAGACGA
CGCCTGGCCCGCGAGGAGGCCGAACGACAGGCGGAATTAGAGCGCCAACG
ACTGGAGGCTGAACGCCTGGCAGAGATCAAAGCCCAAGAGGAGGAGGCGG
AGCGCCAACGCCTGTTCGAGGAGGAGTCCACTCGCCTGGCCGAGGAACAG
CGCCGCGGGGAGGAGGAGCGCCTGCGCAAGGCCATCGAGGAAGCCCAACA
GCGTGAGGAGGAGGAGAAACGCCGGCGCGAGGAGGAGGAGAAACAGCGCG
TGGAACGTGAGGAGGCCGAGAAGAAGGCCAAGGAGGAGGCAGAGAAGCAG
CGCGTCGAGGTGGCTGAGCGCCTTAAGCGGGAGGAGAAGGAGCGCGAGGA
ACGCCGCAAGCGGGTGGAGGCCATCATGCTGCGCACCCGCAAGGGAGGCG
CTGCCACCACACCCTCCAAGGACGCTAACGACAAAGCAGCTCCTGCCGCA
ACGGCTCCAGAGAATAATAGCAGCAGCAACAGCAGCGTCACCGGGAGCAG
CAACAACTCGGCTGAGGGCTCGCCCAGCGCAGCAGATTCCACGCCAGCAC
CAACGGCAACGGAAACTGTCCAGGAGGCGCCAAACAGTCAGGCGATGTAC
GAGCAATCGGTGCTAGACAAGGAGAACTCGCTCATCAATAGCTTCTCCAC
GATGATCATCGATGAGAATGCCAAGAACCTGCAGCAGGTGAGCAACGGCA
AGTTGCTGGTGGACTTTGAGAGCACCAATACTGTGCCGGCGGTGGCCAAC
GGCAATGGACACATCGAGAATGTCAACAACAAGAATGACATCAATCTGCT
GCAGGACGTAGTCGCTCCGGTCGCCACCCAGCTGATTGACCTGAGCATCG
AGTCACAAGATCTACACCTGAACAATAACAACAGCTTGCTGACGAGCACA
GCGGCAACCACCACGCTAGTCACTGCTGATAGTCACGAAAATAAAGATAT
ATCGCTGCTGGCAAGCTTTCTAGACCAT

BO34576.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:57:46
Subject Length Description Subject Range Query Range Score Percent Strand
ens-RH 2547 CG14998-PH 1..2544 17..2560 12720 100 Plus
ens-RB 2556 CG14998-PB 1..2553 17..2560 12595 99.6 Plus
ens-RC 2502 CG14998-PC 55..2499 116..2560 12225 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:57:48
Subject Length Description Subject Range Query Range Score Percent Strand
ens-RH 3878 CG14998-RH 49..2592 17..2560 12720 100 Plus
ens-RB 3887 CG14998-RB 49..2601 17..2560 12595 99.6 Plus
ens-RC 3833 CG14998-RC 103..2547 116..2560 12225 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:57:41
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 4125880..4126703 1790..967 4120 100 Minus
3L 28110227 3L 4125136..4125502 2385..2019 1835 100 Minus
3L 28110227 3L 4131955..4132207 368..116 1265 100 Minus
3L 28110227 3L 4125577..4125810 2021..1788 1170 100 Minus
3L 28110227 3L 4126989..4127163 797..623 875 100 Minus
3L 28110227 3L 4126761..4126932 968..797 860 100 Minus
3L 28110227 3L 4124919..4125079 2546..2386 805 100 Minus
3L 28110227 3L 4131748..4131892 509..365 725 100 Minus
3L 28110227 3L 4131120..4131238 624..506 595 100 Minus
3L 28110227 3L 4133769..4133824 119..64 280 100 Minus
3L 28110227 3L 4134454..4134502 65..17 245 100 Minus
Blast to na_te.dros performed 2014-11-28 14:57:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6729..6827 2063..2160 186 66.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6723..6856 2035..2168 183 61.5 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2392..2538 2027..2166 177 62.8 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2749..2877 2035..2163 176 61.5 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2320..2421 2066..2166 174 64.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2341..2485 2027..2167 173 61.4 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6729..6869 2027..2166 172 63 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6724..6893 2000..2166 166 60.9 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2377..2515 2035..2167 158 61.4 Plus
roo 9092 roo DM_ROO 9092bp 1078..1151 2033..2107 156 69.3 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6778..6980 2000..2219 153 57.8 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6714..6823 2063..2168 152 63.6 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2305..2823 2003..2514 147 53 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2321..2394 2033..2107 147 68 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6811..6920 2000..2107 147 64 Plus
roo 9092 roo DM_ROO 9092bp 1070..1142 2034..2107 142 67.6 Plus
roo 9092 roo DM_ROO 9092bp 1045..1130 2015..2107 124 64.5 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 1516..1572 2056..2107 120 73.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2758..2882 2069..2195 116 57.8 Plus

BO34576.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-03-03 17:23:21 Download gff for BO34576.complete
Subject Subject Range Query Range Percent Splice Strand
ens-RH 49..2592 17..2562 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:27:55 Download gff for BO34576.complete
Subject Subject Range Query Range Percent Splice Strand
ens-RH 49..2592 17..2562 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:27:55 Download gff for BO34576.complete
Subject Subject Range Query Range Percent Splice Strand
3L 4134454..4134502 17..65 100   Minus
3L 4124919..4125079 2386..2546 100 <- Minus
3L 4125136..4125500 2021..2385 100 <- Minus
3L 4125578..4125808 1790..2020 100 <- Minus
3L 4125881..4126702 968..1789 100 <- Minus
3L 4126762..4126931 798..967 100 <- Minus
3L 4126989..4127162 624..797 100 <- Minus
3L 4131121..4131236 508..623 100 <- Minus
3L 4131750..4131889 368..507 100 <- Minus
3L 4131956..4132203 120..367 100 <- Minus
3L 4133769..4133822 66..119 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2014-03-03 17:23:21 Download gff for BO34576.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 4124919..4125079 2386..2546 100 <- Minus
arm_3L 4125136..4125500 2021..2385 100 <- Minus
arm_3L 4125578..4125808 1790..2020 100 <- Minus
arm_3L 4125881..4126702 968..1789 100 <- Minus
arm_3L 4126762..4126931 798..967 100 <- Minus
arm_3L 4126989..4127162 624..797 100 <- Minus
arm_3L 4131121..4131236 508..623 100 <- Minus
arm_3L 4131750..4131889 368..507 100 <- Minus
arm_3L 4131956..4132203 120..367 100 <- Minus
arm_3L 4133769..4133822 66..119 100 <- Minus
arm_3L 4134454..4134502 17..65 100   Minus

BO34576.pep Sequence

Translation from 16 to 2578

> BO34576.pep
MASLGGQHGNISTNPEVENTAKRPESREGSAERKDREEKLKYARDRQNEE
RHRKIEELRAQAEAAQRYREQKEEERRRRIEEIRTRDTEKRHQVEERKKA
IFEAEKERREYILKKNQERESRIEVKKRDRNSIGFAFGSSTPRLLDVPAD
YGLVSPSAFWGQRRSTSISNVAGASLTRRSSERELADSGAKKRASSSTDR
QDGSRSGNATPGGHFNNSRPGSAMSTSTNMSTSGLVPRRPATAPRKPRPA
SIAGTGMSLEEINKLKRDQKPPVKTTAASPSAQTTPKRTANLMSTSLIVT
SSSSRLSSAEKKTPSKREPPVPKAASASKALPSRTASSERISRLTKEPKT
KDTSAMTRSMIVTSSSTSTITKPAPAPVAPTSAPVPEQNGVAKEVEKTTA
DEPVPEAEVPTEAPVVVPSVSKAEKEALNTEKTEEGARQEEEQILAVESV
PEALVTSINVEEKSDEGNEKEVPKPQEQAAPKKPSRSKENSEVRELTPPE
GADLMTASMMAKKITTEEEAKAALAERRRLAREEAERQAELERQRLEAER
LAEIKAQEEEAERQRLFEEESTRLAEEQRRGEEERLRKAIEEAQQREEEE
KRRREEEEKQRVEREEAEKKAKEEAEKQRVEVAERLKREEKEREERRKRV
EAIMLRTRKGGAATTPSKDANDKAAPAATAPENNSSSNSSVTGSSNNSAE
GSPSAADSTPAPTATETVQEAPNSQAMYEQSVLDKENSLINSFSTMIIDE
NAKNLQQVSNGKLLVDFESTNTVPAVANGNGHIENVNNKNDINLLQDVVA
PVATQLIDLSIESQDLHLNNNNSLLTSTAATTTLVTADSHENKDISLLAS
FLDH

BO34576.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:58:03
Subject Length Description Subject Range Query Range Score Percent Strand
ens-PH 848 CG14998-PH 1..848 1..848 4178 100 Plus
ens-PB 851 CG14998-PB 1..851 1..848 4164 99.6 Plus
ens-PA 887 CG14998-PA 1..887 1..848 4128 95.6 Plus
ens-PL 898 CG14998-PL 1..898 1..848 4106 94.4 Plus
ens-PE 898 CG14998-PE 1..898 1..848 4106 94.4 Plus