BO34579.complete Sequence
1060 bp assembled on 2013-10-29
GenBank Submission: KX798639
> BO34579.complete
GAAGTTATCAGTCGACATGTCGGTTAATACGGCTCACGCCAACAATGGCG
TGCTCATCCATGCTGGAGAGTACATACTGCTCCACAGCGACAGTGTCTCC
ATGGAGTTCTCCGGTCAGGACAATCCCATCTTCAAGGGCTCCAAAGGTGG
CAGGATTTATCTCACCTCCCACCGAATGATCTTCAATAGCAAGAAGTCCT
CGGATTCGATGCAGTCGTTCAGTGCCCCGTTTGTTGCTCTTTCGGATGTG
GAAATCGAACAGCCCGTTTTCGGGGCCAACTACATCAAGGGAAAGGTTCG
CGCTCAGCCAAATGGAAACTACGTGGGCGAGGTCAAGTTCAAGCTCCATT
TCAAGGCAGGCGGCGCAATTGAATATGGTCAAGCTCTACTGCGCTCCGCC
AAGACGGCGATGAACAACTACCACCGCGGTGGTCTGGCTGGTGATGATCC
GCCACCATATCAGCCGGCTGGATCCTGGAATGAGGCACCACCGCCGGCAT
ATCAGCCACCACCTGGCTACTATGGCTGGCTGCCGCAGCATGACGCATTC
AGCGGCCCTGCGCCGAATACGGTCTATATGAGCGACAATCCGCCGCCGTA
TCCGGGTATCGCACCACCTGCTCACCAACCAGCACCGCAACAGCCGCAGG
CACCGTCGTCGAATGAACCCAATTGGTATGGTTTTTCAGCGCCGCCGCCG
CAGCAGCAACAACAGCAGCCGGGCTATGGGCCACAAGGATGGGCCGGTGG
CTATGTCCAACCTCCGCCGTACGCTTCATGTGCCCCAAATTGTCCACCAC
AGCCGCCGTACGCCGCTCCGGCTCAGACGTACAATGGTCCACAGCCATAT
GGTGGATACGGCAATGTTCCTGGCGGATTTAATACCCCCGGATTTCAGCA
ACCGAATGGAAATCCAAATGGCTATCCAGGTGGACCACCGCCACCCGGAC
AACAAGCAGCAGGAGCAGCTGGAGGAGCCGCCGCATCTGGAGCCAGCTTT
ATGGGCTTCAGCTTGCCCCCTGGAACAAAAGATAAAAAAATAGCAAGCTT
TCTAGACCAT
BO34579.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:12:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Wbp2-RG | 1029 | CG11009-PG | 1..1026 | 17..1042 | 5130 | 100 | Plus |
| Wbp2-RC | 1014 | CG11009-PC | 1..1009 | 17..1025 | 5045 | 100 | Plus |
| Wbp2-RB | 1014 | CG11009-PB | 1..1009 | 17..1025 | 5045 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:12:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Wbp2-RG | 1369 | CG11009-RG | 109..1137 | 14..1042 | 5145 | 100 | Plus |
| Wbp2-RC | 1751 | CG11009-RC | 109..1120 | 14..1025 | 5060 | 100 | Plus |
| Wbp2-RB | 1758 | CG11009-RB | 109..1120 | 14..1025 | 5060 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:12:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 12851308..12851722 | 611..1025 | 2075 | 100 | Plus |
| 3L | 28110227 | 3L | 12850498..12850797 | 73..372 | 1500 | 100 | Plus |
| 3L | 28110227 | 3L | 12850915..12851153 | 373..611 | 1195 | 100 | Plus |
| 3L | 28110227 | 3L | 12850273..12850331 | 14..72 | 295 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 14:12:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| TART-B | 10654 | TART-B DM14101 10654bp Derived from U14101 (g603662) (Rel. 42, Last updated, Version 1). | 136..192 | 686..739 | 116 | 72.4 | Plus |
| TART-B | 10654 | TART-B DM14101 10654bp Derived from U14101 (g603662) (Rel. 42, Last updated, Version 1). | 9166..9222 | 686..739 | 116 | 72.4 | Plus |
| roo | 9092 | roo DM_ROO 9092bp | 1031..1090 | 661..721 | 113 | 67.2 | Plus |
BO34579.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-10-29 16:45:22 Download gff for
BO34579.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Wbp2-RG | 117..1126 | 17..1026 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:43:19 Download gff for
BO34579.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Wbp2-RG | 112..1121 | 17..1026 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:43:19 Download gff for
BO34579.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 12850276..12850331 | 17..72 | 100 | -> | Plus |
| 3L | 12850498..12850797 | 73..372 | 100 | -> | Plus |
| 3L | 12850915..12851153 | 373..611 | 100 | -> | Plus |
| 3L | 12851309..12851722 | 612..1026 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-10-29 16:45:22 Download gff for
BO34579.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 12843376..12843431 | 17..72 | 100 | -> | Plus |
| arm_3L | 12843598..12843897 | 73..372 | 100 | -> | Plus |
| arm_3L | 12844015..12844253 | 373..611 | 100 | -> | Plus |
| arm_3L | 12844409..12844822 | 612..1026 | 99 | | Plus |
BO34579.pep Sequence
Translation from 16 to 1060
> BO34579.pep
MSVNTAHANNGVLIHAGEYILLHSDSVSMEFSGQDNPIFKGSKGGRIYLT
SHRMIFNSKKSSDSMQSFSAPFVALSDVEIEQPVFGANYIKGKVRAQPNG
NYVGEVKFKLHFKAGGAIEYGQALLRSAKTAMNNYHRGGLAGDDPPPYQP
AGSWNEAPPPAYQPPPGYYGWLPQHDAFSGPAPNTVYMSDNPPPYPGIAP
PAHQPAPQQPQAPSSNEPNWYGFSAPPPQQQQQQPGYGPQGWAGGYVQPP
PYASCAPNCPPQPPYAAPAQTYNGPQPYGGYGNVPGGFNTPGFQQPNGNP
NGYPGGPPPPGQQAAGAAGGAAASGASFMGFSLPPGTKDKKIASFLDH
BO34579.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:52:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Wbp2-PG | 342 | CG11009-PG | 1..342 | 1..342 | 1913 | 100 | Plus |
| Wbp2-PE | 384 | CG11009-PE | 1..344 | 1..344 | 1884 | 98 | Plus |
| Wbp2-PC | 337 | CG11009-PC | 1..336 | 1..336 | 1883 | 100 | Plus |
| Wbp2-PB | 337 | CG11009-PB | 1..336 | 1..336 | 1883 | 100 | Plus |
| Wbp2-PF | 199 | CG11009-PF | 1..198 | 1..198 | 1075 | 100 | Plus |
