Clone BO34580 Report

Search the DGRC for BO34580

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:345
Well:80
Vector:pDNR-Dual
Associated Gene/TranscriptCG32694-RG
Protein status:BO34580.pep: Imported from assembly
Sequenced Size:619

Clone Sequence Records

BO34580.complete Sequence

619 bp assembled on 2013-10-29

GenBank Submission: KX798748

> BO34580.complete
GAAGTTATCAGTCGACATGAGGCAGCCAAGTAGACAGCACATCCTGGCGC
TCCTGATCCTCGGCAGCGCCGCCTGCCTCATCAGCGCCGTACCGCTACCG
CAGCCCGCCAACGGTAATTCCGAGCTGGACGTCCTCCAAATCCCGCTTGC
CAATGGCAAGGAAATCGATGTCTTGACATTGGGCGCCAAAGACCAAGAAT
CATTGATAGCCGATCGCAACAAACGAACGATTGGACTGCTGCGCGAACTT
TTCCCCGACATCACCAAGGAAATCGACTCCATAGTAAATCGAATTATAGC
CCAGGTGATTCGGGTGGCCGGTCCTGGTCTTCTGAATACCATATTGGCCG
GAAATCGAGGTGGTGCGGGTGGTGCAGCCGGTGGAGGTACAACGCCGGCT
AGCGATTTCGATGCCGATTTCGATGCGGACTTTGACGAGGATGACGATGT
GGCGCCATCAAGTAGTCCGGCCACACGGAGTGCAGGTAGTGCACCATCGA
GCAGCACCAACGAGGTGGAAGAAAGCCGGCGAGTGAAAATCGATTTGCCC
ACGTTTGCACCACAATCTGGAGCAGGAGCAGATGAAACGAAAGAGATAAT
AGCAAGCTTTCTAGACCAT

BO34580.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:12:26
Subject Length Description Subject Range Query Range Score Percent Strand
CG32694-RG 588 CG32694-PG 1..585 17..601 2925 100 Plus
CG32694-RB 1095 CG32694-PB 1..577 17..593 2885 100 Plus
CG32694-RE 564 CG32694-PE 1..261 17..277 1290 99.6 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:12:28
Subject Length Description Subject Range Query Range Score Percent Strand
CG32694-RG 2729 CG32694-RG 246..831 16..601 2930 100 Plus
CG32694-RB 3153 CG32694-RB 246..823 16..593 2890 100 Plus
CG32694-RH 3542 CG32694-RH 1310..1644 267..601 1675 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:12:25
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 10000350..10000676 267..593 1635 100 Plus
X 23542271 X 9993045..9993190 16..161 730 100 Plus
X 23542271 X 9999191..9999301 159..269 555 100 Plus
Blast to na_te.dros performed on 2014-11-28 14:12:25 has no hits.

BO34580.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-10-29 16:45:23 Download gff for BO34580.complete
Subject Subject Range Query Range Percent Splice Strand
CG32694-RG 247..831 17..603 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:43:21 Download gff for BO34580.complete
Subject Subject Range Query Range Percent Splice Strand
CG32694-RG 247..831 17..603 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:43:21 Download gff for BO34580.complete
Subject Subject Range Query Range Percent Splice Strand
X 9999193..9999300 161..268 100 -> Plus
X 9993046..9993189 17..160 100 -> Plus
X 10000352..10000687 269..603 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-10-29 16:45:23 Download gff for BO34580.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 9887079..9887222 17..160 100 -> Plus
arm_X 9893226..9893333 161..268 100 -> Plus
arm_X 9894385..9894720 269..603 98   Plus

BO34580.pep Sequence

Translation from 16 to 619

> BO34580.pep
MRQPSRQHILALLILGSAACLISAVPLPQPANGNSELDVLQIPLANGKEI
DVLTLGAKDQESLIADRNKRTIGLLRELFPDITKEIDSIVNRIIAQVIRV
AGPGLLNTILAGNRGGAGGAAGGGTTPASDFDADFDADFDEDDDVAPSSS
PATRSAGSAPSSSTNEVEESRRVKIDLPTFAPQSGAGADETKEIIASFLD
H

BO34580.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:52:15
Subject Length Description Subject Range Query Range Score Percent Strand
CG32694-PG 195 CG32694-PG 1..195 1..195 970 100 Plus
CG32694-PB 364 CG32694-PB 1..192 1..192 957 100 Plus
CG32694-PE 187 CG32694-PE 1..172 1..192 566 64.1 Plus
CG32694-PH 167 CG32694-PH 1..142 1..149 472 68.5 Plus
CG32694-PF 344 CG32694-PF 1..166 1..185 435 55.7 Plus