BO34580.complete Sequence
619 bp assembled on 2013-10-29
GenBank Submission: KX798748
> BO34580.complete
GAAGTTATCAGTCGACATGAGGCAGCCAAGTAGACAGCACATCCTGGCGC
TCCTGATCCTCGGCAGCGCCGCCTGCCTCATCAGCGCCGTACCGCTACCG
CAGCCCGCCAACGGTAATTCCGAGCTGGACGTCCTCCAAATCCCGCTTGC
CAATGGCAAGGAAATCGATGTCTTGACATTGGGCGCCAAAGACCAAGAAT
CATTGATAGCCGATCGCAACAAACGAACGATTGGACTGCTGCGCGAACTT
TTCCCCGACATCACCAAGGAAATCGACTCCATAGTAAATCGAATTATAGC
CCAGGTGATTCGGGTGGCCGGTCCTGGTCTTCTGAATACCATATTGGCCG
GAAATCGAGGTGGTGCGGGTGGTGCAGCCGGTGGAGGTACAACGCCGGCT
AGCGATTTCGATGCCGATTTCGATGCGGACTTTGACGAGGATGACGATGT
GGCGCCATCAAGTAGTCCGGCCACACGGAGTGCAGGTAGTGCACCATCGA
GCAGCACCAACGAGGTGGAAGAAAGCCGGCGAGTGAAAATCGATTTGCCC
ACGTTTGCACCACAATCTGGAGCAGGAGCAGATGAAACGAAAGAGATAAT
AGCAAGCTTTCTAGACCAT
BO34580.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:12:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32694-RG | 588 | CG32694-PG | 1..585 | 17..601 | 2925 | 100 | Plus |
CG32694-RB | 1095 | CG32694-PB | 1..577 | 17..593 | 2885 | 100 | Plus |
CG32694-RE | 564 | CG32694-PE | 1..261 | 17..277 | 1290 | 99.6 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:12:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32694-RG | 2729 | CG32694-RG | 246..831 | 16..601 | 2930 | 100 | Plus |
CG32694-RB | 3153 | CG32694-RB | 246..823 | 16..593 | 2890 | 100 | Plus |
CG32694-RH | 3542 | CG32694-RH | 1310..1644 | 267..601 | 1675 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:12:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 10000350..10000676 | 267..593 | 1635 | 100 | Plus |
X | 23542271 | X | 9993045..9993190 | 16..161 | 730 | 100 | Plus |
X | 23542271 | X | 9999191..9999301 | 159..269 | 555 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 14:12:25 has no hits.
BO34580.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-10-29 16:45:23 Download gff for
BO34580.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32694-RG | 247..831 | 17..603 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:43:21 Download gff for
BO34580.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32694-RG | 247..831 | 17..603 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:43:21 Download gff for
BO34580.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 9999193..9999300 | 161..268 | 100 | -> | Plus |
X | 9993046..9993189 | 17..160 | 100 | -> | Plus |
X | 10000352..10000687 | 269..603 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-10-29 16:45:23 Download gff for
BO34580.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 9887079..9887222 | 17..160 | 100 | -> | Plus |
arm_X | 9893226..9893333 | 161..268 | 100 | -> | Plus |
arm_X | 9894385..9894720 | 269..603 | 98 | | Plus |
BO34580.pep Sequence
Translation from 16 to 619
> BO34580.pep
MRQPSRQHILALLILGSAACLISAVPLPQPANGNSELDVLQIPLANGKEI
DVLTLGAKDQESLIADRNKRTIGLLRELFPDITKEIDSIVNRIIAQVIRV
AGPGLLNTILAGNRGGAGGAAGGGTTPASDFDADFDADFDEDDDVAPSSS
PATRSAGSAPSSSTNEVEESRRVKIDLPTFAPQSGAGADETKEIIASFLD
H
BO34580.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:52:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32694-PG | 195 | CG32694-PG | 1..195 | 1..195 | 970 | 100 | Plus |
CG32694-PB | 364 | CG32694-PB | 1..192 | 1..192 | 957 | 100 | Plus |
CG32694-PE | 187 | CG32694-PE | 1..172 | 1..192 | 566 | 64.1 | Plus |
CG32694-PH | 167 | CG32694-PH | 1..142 | 1..149 | 472 | 68.5 | Plus |
CG32694-PF | 344 | CG32694-PF | 1..166 | 1..185 | 435 | 55.7 | Plus |