BO34581.complete Sequence
691 bp assembled on 2013-10-29
GenBank Submission: KX799683
> BO34581.complete
GAAGTTATCAGTCGACATGGAGCCCAACGATGAGGTGGTGGAGCGACAGA
AGCTGGTGAACGACGTGGAAACGGAGGAGGAAGCCCAAAGCGCACCGAAA
TCGGCCACACCCGCCTCGCCCGCCGTTCCGAATATCAAAATCAAAGGCAT
ATCCAGCGGCGAGACCACTCGCAGCAGAAACTCGGCCTCCTGCTCCATCG
AGAGGACGATATCCGAAAAGGAGAAGGACAAGAGCCAGGGCCAGGGTCAA
GCGGCCACCAAGGTGACCTATGTGAATGAGCGCCGGCCACGCCCGCAGGC
GCACGGCGGCAGTGGCGGGGGTGCCGGCGACGAAAGATTCGAGTTCAAGA
CCCGGCCGCGCAAACTCCTGAAAGTTCCCGATGTTAAGCACATGGAAAGA
GCTCTCCTCGGACTGCTGGACGACTTTCACTCCGGCAAGCTGAGGGCATT
CGCAGGCTCCGGCTGCACAATGGACCAGATGACCAAGATTCGCGAGCAGC
AGGAGAGCCTGGCCAAATTGCATTTCGAACTGGCTGCCGCCGAGGAGGAT
TCGCTGGAGCACGGCAACGAGTTCAACACCAACAAGGCGCAGGAGAACAT
GCTGCAGCTGATGCAGCGCCTGGAACAGCTATCCATCTCCATCGAGCAGC
TGCAGACGAGCCACACGGGTCTCGCAAGCTTTCTAGACCAT
BO34581.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:12:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10874-RC | 660 | CG10874-PC | 1..657 | 17..673 | 3285 | 100 | Plus |
| CG10874-RB | 657 | CG10874-PB | 1..654 | 17..673 | 3205 | 99.5 | Plus |
| CG10874-RD | 954 | CG10874-PD | 1..358 | 17..374 | 1790 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:12:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10874-RC | 1292 | CG10874-RC | 124..780 | 17..673 | 3285 | 100 | Plus |
| CG10874-RB | 1289 | CG10874-RB | 124..777 | 17..673 | 3205 | 99.5 | Plus |
| CG10874-RD | 1586 | CG10874-RD | 124..481 | 17..374 | 1790 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:12:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 2191850..2192090 | 374..134 | 1205 | 100 | Minus |
| 2L | 23513712 | 2L | 2190426..2190647 | 673..452 | 1110 | 100 | Minus |
| 2L | 23513712 | 2L | 2192147..2192263 | 133..17 | 585 | 100 | Minus |
| 2L | 23513712 | 2L | 2190707..2190787 | 452..372 | 405 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 14:12:30 has no hits.
BO34581.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-10-29 16:45:25 Download gff for
BO34581.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10874-RC | 124..780 | 17..675 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:43:23 Download gff for
BO34581.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10874-RC | 124..780 | 17..675 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:43:23 Download gff for
BO34581.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 2191850..2192090 | 134..374 | 100 | <- | Minus |
| 2L | 2192147..2192263 | 17..133 | 100 | | Minus |
| 2L | 2190423..2190646 | 453..675 | 99 | <- | Minus |
| 2L | 2190707..2190784 | 375..452 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-10-29 16:45:25 Download gff for
BO34581.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 2191850..2192090 | 134..374 | 100 | <- | Minus |
| arm_2L | 2192147..2192263 | 17..133 | 100 | | Minus |
| arm_2L | 2190423..2190646 | 453..675 | 99 | <- | Minus |
| arm_2L | 2190707..2190784 | 375..452 | 100 | <- | Minus |
BO34581.pep Sequence
Translation from 16 to 691
> BO34581.pep
MEPNDEVVERQKLVNDVETEEEAQSAPKSATPASPAVPNIKIKGISSGET
TRSRNSASCSIERTISEKEKDKSQGQGQAATKVTYVNERRPRPQAHGGSG
GGAGDERFEFKTRPRKLLKVPDVKHMERALLGLLDDFHSGKLRAFAGSGC
TMDQMTKIREQQESLAKLHFELAAAEEDSLEHGNEFNTNKAQENMLQLMQ
RLEQLSISIEQLQTSHTGLASFLDH
BO34581.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:52:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10874-PC | 219 | CG10874-PC | 1..219 | 1..219 | 1109 | 100 | Plus |
| CG10874-PB | 218 | CG10874-PB | 1..218 | 1..219 | 1093 | 99.5 | Plus |
| CG10874-PA | 316 | CG10874-PA | 1..122 | 1..122 | 605 | 98.4 | Plus |
| CG10874-PD | 317 | CG10874-PD | 1..122 | 1..122 | 605 | 98.4 | Plus |
| CG10874-PD | 317 | CG10874-PD | 163..317 | 66..219 | 518 | 70.9 | Plus |
| CG10874-PA | 316 | CG10874-PA | 163..316 | 66..219 | 502 | 70.3 | Plus |
