BO34591.complete Sequence
358 bp assembled on 2013-10-29
GenBank Submission: KX793886
> BO34591.complete
GAAGTTATCAGTCGACATGAACATCGTAAGCACTCAACTAGGGAATAGTT
TGTATAACTGCGTGCGATCTAATCTAAGATGGCCCTTGTGGACTCGATCA
CATTTTACCTACTATCCTACACGTATGGGAACTGGAAAACGAATGAATAT
GTTTAACGCCATTAATAACGCAATGGATTTGGCTCTAGACGAAAACAAAT
CCGCATTGTTGTTTGGCGAGGATGTGGGATTCGGTGGAGTTTTTCGGTGT
TCAGTAAATCTACGGGATAAGTACGGAAGTCAGCGTGTTTTTAATACCCC
CTTATGTGAGCAAGGAATCGCAGGGTACCCCGTGGACCGAGCAAGCTTTC
TAGACCAT
BO34591.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:11:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17691-RF | 321 | CG17691-PF | 1..312 | 17..328 | 1560 | 100 | Plus |
| CG17691-RE | 1095 | CG17691-PE | 1..308 | 17..324 | 1540 | 100 | Plus |
| CG17691-RC | 1095 | CG17691-PC | 1..308 | 17..324 | 1540 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:11:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17691-RF | 479 | CG17691-RF | 85..396 | 17..328 | 1560 | 100 | Plus |
| CG17691-RE | 1221 | CG17691-RE | 85..392 | 17..324 | 1540 | 100 | Plus |
| CG17691-RC | 1244 | CG17691-RC | 108..415 | 17..324 | 1540 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:11:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 1590654..1590885 | 17..248 | 1160 | 100 | Plus |
| 2R | 25286936 | 2R | 1590939..1591021 | 246..328 | 415 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 14:11:33 has no hits.
BO34591.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-10-29 16:45:06 Download gff for
BO34591.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17691-RG | 92..415 | 17..342 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:43:02 Download gff for
BO34591.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17691-RF | 85..398 | 17..333 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:43:02 Download gff for
BO34591.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 1590654..1590883 | 17..246 | 100 | -> | Plus |
| 2R | 1590940..1591017 | 247..324 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-10-29 16:45:06 Download gff for
BO34591.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ArmU | 1178971..1179200 | 17..246 | 100 | -> | Plus |
| ArmU | 1179257..1179334 | 247..324 | 100 | -> | Plus |
BO34591.pep Sequence
Translation from 16 to 358
> BO34591.pep
MNIVSTQLGNSLYNCVRSNLRWPLWTRSHFTYYPTRMGTGKRMNMFNAIN
NAMDLALDENKSALLFGEDVGFGGVFRCSVNLRDKYGSQRVFNTPLCEQG
IAGYPVDRASFLDH
BO34591.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:51:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17691-PF | 106 | CG17691-PF | 1..106 | 1..106 | 564 | 98.1 | Plus |
| CG17691-PE | 364 | CG17691-PE | 1..110 | 1..110 | 562 | 94.5 | Plus |
| CG17691-PC | 364 | CG17691-PC | 1..110 | 1..110 | 562 | 94.5 | Plus |
