BO34593.complete Sequence
733 bp assembled on 2013-10-29
GenBank Submission: KX797304
> BO34593.complete
GAAGTTATCAGTCGACATGCGAAATAAATTTCAATCCGCTATTAGGGGCG
TAACGCGACAATACATTATAAGATCGTGGCCCCGAGGCAGAGAGCTATTG
AGGACGCAACTGATTATCCCGCCATCTTCTACATCTAGCCCATTTACCTG
TAGAAACTACTCAAAGTTTAGCACACATTTGTCTATGGAGCGGGCGTTGG
AGTTGCTATGCAACCTTGATGACGAGGAACGCGGCAACCTGCGCTCCGCT
CTTGGCAGGCTAGATGCCGACAAGGAAAAAAAATTATACGAGATTGAGAC
GGCAGCATCCCCCACGGCAGGTCAATTGTACAGCATTTTCTTTGTAAATG
CAGTGCCGTTTATCGCTTTCGGATTCCTTGACAATTTCATAATGATCATG
GCGGGTGAATACATTGAATATTATTTGGGCCACTTTATAACGCTGTCTAC
AATGGCAGCCGCAGGACTAGGAAACACCATAAGCGATATTTTAGGCATCA
CTATGGCCACCTACGTTGAGAATGGGTGCCAGATATTGGGTCTAAAGCAG
CCCAATTTGACTCCAGCGCAATTTGAATTAAAGTCTAGCAAGCGGTCTTC
AAGTTACGGACGGATTGTCGGGATCACTGTAGGCTGTTTGCTTGGAATGT
GTCCTTTATGGTTTATGGATGAAAAAGCAGATAAGGTGAATGTAAAAGAT
GAAATCCCGAAAAATGCAAGCTTTCTAGACCAT
BO34593.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:11:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG17715-RC | 702 | CG17715-PC | 1..699 | 17..715 | 3495 | 100 | Plus |
CG17715-RF | 702 | CG17715-PF | 1..699 | 17..715 | 3495 | 100 | Plus |
CG17715-RB | 825 | CG17715-PB | 401..822 | 294..715 | 2110 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:11:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG17715-RC | 1501 | CG17715-RC | 293..991 | 17..715 | 3495 | 100 | Plus |
CG17715-RF | 4284 | CG17715-RF | 352..1050 | 17..715 | 3495 | 100 | Plus |
CG17715-RE | 1804 | CG17715-RE | 873..1294 | 294..715 | 2110 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:11:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 808244..808520 | 293..17 | 1385 | 100 | Minus |
2L | 23513712 | 2L | 22844571..22844847 | 17..293 | 1385 | 100 | Plus |
2R | 25286936 | 2R | 803458..803663 | 608..403 | 1030 | 100 | Minus |
2L | 23513712 | 2L | 22849428..22849633 | 403..608 | 1030 | 100 | Plus |
2R | 25286936 | 2R | 803291..803402 | 715..604 | 545 | 99.1 | Minus |
2L | 23513712 | 2L | 22849689..22849800 | 604..715 | 545 | 99.1 | Plus |
2R | 25286936 | 2R | 803717..803785 | 404..336 | 345 | 100 | Minus |
2L | 23513712 | 2L | 22849306..22849374 | 336..404 | 345 | 100 | Plus |
2R | 25286936 | 2R | 803836..803877 | 335..294 | 210 | 100 | Minus |
2L | 23513712 | 2L | 22849214..22849255 | 294..335 | 210 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 14:11:37 has no hits.
BO34593.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-10-29 16:45:07 Download gff for
BO34593.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17715-RF | 352..1050 | 17..717 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:43:03 Download gff for
BO34593.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17715-RF | 352..1050 | 17..717 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:43:03 Download gff for
BO34593.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 22844571..22844847 | 17..293 | 100 | -> | Plus |
2L | 22849214..22849255 | 294..335 | 100 | -> | Plus |
2L | 22849306..22849373 | 336..403 | 100 | -> | Plus |
2L | 22849429..22849632 | 404..607 | 100 | -> | Plus |
2L | 22849693..22849800 | 608..717 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-10-29 16:45:07 Download gff for
BO34593.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 22737303..22737579 | 17..293 | 100 | -> | Plus |
arm_2L | 22741946..22741987 | 294..335 | 100 | -> | Plus |
arm_2L | 22742038..22742105 | 336..403 | 100 | -> | Plus |
arm_2L | 22742161..22742364 | 404..607 | 100 | -> | Plus |
arm_2L | 22742425..22742532 | 608..717 | 98 | | Plus |
BO34593.pep Sequence
Translation from 16 to 733
> BO34593.pep
MRNKFQSAIRGVTRQYIIRSWPRGRELLRTQLIIPPSSTSSPFTCRNYSK
FSTHLSMERALELLCNLDDEERGNLRSALGRLDADKEKKLYEIETAASPT
AGQLYSIFFVNAVPFIAFGFLDNFIMIMAGEYIEYYLGHFITLSTMAAAG
LGNTISDILGITMATYVENGCQILGLKQPNLTPAQFELKSSKRSSSYGRI
VGITVGCLLGMCPLWFMDEKADKVNVKDEIPKNASFLDH
BO34593.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:51:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG17715-PC | 233 | CG17715-PC | 1..233 | 1..233 | 1203 | 100 | Plus |
CG17715-PF | 233 | CG17715-PF | 1..233 | 1..233 | 1203 | 100 | Plus |
CG17715-PB | 274 | CG17715-PB | 1..274 | 1..233 | 1150 | 84.7 | Plus |
CG17715-PD | 274 | CG17715-PD | 1..274 | 1..233 | 1150 | 84.7 | Plus |
CG17715-PG | 269 | CG17715-PG | 1..267 | 1..226 | 1101 | 83.1 | Plus |