BO34595.complete Sequence
2344 bp assembled on 2014-03-03
GenBank Submission: KX797318
> BO34595.complete
GAAGTTATCAGTCGACATGGATTTTCGAGAGCTAGATAAATTAAACTGGC
GTTTGCATCTGAGTAACAATAACAATATCGTTAATTATAGTGCGAACCGA
CACCTCGGTCCTGATGCGGCTGAAGAGCGACGCCCGGAGCTCTTAGTCAG
CCAAGTCAATTGTGGGACCGGTGTAAATACAATGGGCACAAATCAAAAAC
GAGCAGCAACAACATCAGCGCAGGCCGTAGCGGTGGACGAGCAGGTCGTG
GGAGCCGTGGGTGGTGGCGGGGCAAAGGCAGAGGAGTGCCCTGCAGCGAC
CATGGCCGCAGAGGATGGTGATAAGGTGGAAAGTCCTTCTTACTGCGAAC
TGGATCTGGACGTGGCAAGCTACGGGCTAGCAGCAGCTGCCCTCTCATCC
TTTGAAGCCGCCGCCTGTGGCTATAATTCCAGCCGAACTTCCATAAACAA
CTCAACCGAAAACCTGAGCTATGCCAGTGACAATATTTACGGCGACGATA
TAATTTTGCTGGACGACAACGACATGAACGCGGAGGAGATATCTATCAAC
TCCGACGACTGCGTCTACGCTTACCGTGGTGAAGGGGCTGATTTTGACAT
GAACATGGATATCATCGCCACGGGAAGGGTTGGCGGGCAACACTTCGACC
TTGGCCGAGGACCAGTGAATGCTATGGGAGGCGATAGCCTCATTTACGGC
GAAGATGAGACGGAGTTTCTTGAAATGGACTTTGAGCCAGACCCCTCATC
AGAGTTGGAGCTTGTTGGCGGAACCACCGATATGACCATCCAGCCTCAGG
CCAATTTGTTGTTAATGCAACGCGACTATAGCCAAATGAACAGCATAGGC
GGAACTACTTCTACGCAGGAAGGAAAGCTGCACAGCTCGCCCATAGATGA
TTTTCCGCAGGAGGACCTAATGCAGCAGCAAAAGCTACGCCTTAGTAAGA
AGTTCGCGCGCATCAGCTTGAATTTAGATAAAATCAAAGACGTTGGTGCT
GGTGGAAGTGGCGTGGACATAGATTTAAATGAGCTAATAGTTATTGGCTC
GGAAAAGCAGGCTGAATCCTCCGGAAGCTTTCGGTCAGTGAAGTCTTATC
AGGCTCATTCCTTGCCCAACACATTGCACACAGGCTCAAATTTTTCGCGC
AGCACTAGTGTCCCCAGCGAACACCCAGAGCCTAAGCTGACTGGTGCTAA
GCCAAAGCGTTTTTTGCACACCTCGTCTGTGATGACTAAAAGCTCCTCAT
ATAAGTCGCGGCGCTCTCATACATCAGCTAGCTTTGATGAACGTTGCTAC
AGCTGCACTGATTTCCGGGCAACAACATGTCAGCAGCAACAGTCAGGGTC
GAAGTCAAAGCAAGATCAAGTGCCTCCTATACTGGTGGCTCCTGCGACTG
TTGGGGCTTTGACCACGTCTTCTTCGTGCACGGGCCAATTTGACTTGGGA
ATAACCGAGGAGAACTGCTTAGACTGCCTAGAAAAGGAGTTCTTGGCCAA
TACCATAGGCAAAGTCGTAGACCCGGGAACATGTCCTAAGTGTCGTAGAT
CAGCTGGCAGTCGGGGCAGTAGTATTTCGCTTTACTCACGGTCGGACCAG
GTTCGCTGTCGAAGCGGGTCCCCAGTATACTGCTATGGAGGTCCGTTCGC
CGGCTGGCACAGCTTAATAGCAACCGGAATTGTTTCTGGTTCCAATTTGG
GTCCACCCTGCAACCAAAGGTTTATTTCGTGTGATAATAGTTTCAACGGT
CTACAGCTCCTCAATCAAGGCTATCTGACTGAGCCACTGGTGGCAAGTCT
GTCTACAGGAAAGACGTGCGACGAGGAGCACCTAGTGCAAGCGCTAGATA
AACTGCGCGTACCCTATGACAGGGAGCTACTTCATGGCTATTTCAAGCAA
TTGGCCAAGCGGCGACGGACGGAAAGTAGTGTCAATCTCAAGCAGCTATT
AATACAGGCCTCAAAGCAGCAGGGAAACCATCGCAAGCTCAAACGGTTGA
TCGAGATGGCGACCCACCAACAGCTTATTGTACAATTTAAGGGGAAAGCT
GCAGACAAAACTGAATGGGTGCCTATAAATGTAAGGGACATACTTAATGC
CTGGGCACGTTGTCGAGATCTTTCCCTCCTTCAGCAACTAGATGACCGCT
TTCATTGCGCAAACGTGATGGGAAAGGTTGGTCACATCGTGCGTCAGGCA
ACAGTAGCAGCATCCACACAAGCACAGGCATCGTCGTCAACCTCCTTTTG
TAAACGCACCCTGCCCGAATATTTAATGATCCCGCAGTATTACATGAGTG
GGGTACTGACTCTAACCCGCAAATGTGCAAGCTTTCTAGACCAT
BO34595.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:57:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3651-RD | 2313 | CG3651-PD | 1..2310 | 17..2326 | 11550 | 100 | Plus |
| CG3651-RC | 2313 | CG3651-PC | 1..2310 | 17..2326 | 11550 | 100 | Plus |
| CG3651-RB | 2148 | CG3651-PB | 1..2145 | 182..2326 | 10725 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:57:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3651-RD | 4020 | CG3651-RD | 33..2342 | 17..2326 | 11550 | 100 | Plus |
| CG3651-RC | 2526 | CG3651-RC | 33..2342 | 17..2326 | 11550 | 100 | Plus |
| CG3651-RB | 2527 | CG3651-RB | 76..2312 | 90..2326 | 11185 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:57:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 22122248..22123681 | 323..1756 | 7170 | 100 | Plus |
| 2L | 23513712 | 2L | 22121872..22122181 | 17..326 | 1550 | 100 | Plus |
| 2L | 23513712 | 2L | 22123739..22124028 | 1755..2044 | 1450 | 100 | Plus |
| 2L | 23513712 | 2L | 22124781..22124936 | 2171..2326 | 780 | 100 | Plus |
| 2L | 23513712 | 2L | 22124089..22124221 | 2044..2176 | 650 | 99.2 | Plus |
Blast to na_te.dros performed on 2014-11-28 14:57:54 has no hits.
BO34595.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-03-03 17:23:23 Download gff for
BO34595.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3651-RC | 33..2342 | 17..2328 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:28:00 Download gff for
BO34595.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3651-RC | 33..2342 | 17..2328 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:28:00 Download gff for
BO34595.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 22124782..22124936 | 2172..2328 | 98 | | Plus |
| 2L | 22121872..22122180 | 17..325 | 100 | -> | Plus |
| 2L | 22122251..22123681 | 326..1756 | 100 | -> | Plus |
| 2L | 22123741..22124028 | 1757..2044 | 100 | -> | Plus |
| 2L | 22124090..22124216 | 2045..2171 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-03-03 17:23:23 Download gff for
BO34595.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 22121872..22122180 | 17..325 | 100 | -> | Plus |
| arm_2L | 22122251..22123681 | 326..1756 | 100 | -> | Plus |
| arm_2L | 22123741..22124028 | 1757..2044 | 100 | -> | Plus |
| arm_2L | 22124090..22124216 | 2045..2171 | 100 | -> | Plus |
| arm_2L | 22124782..22124936 | 2172..2328 | 98 | | Plus |
BO34595.pep Sequence
Translation from 16 to 2344
> BO34595.pep
MDFRELDKLNWRLHLSNNNNIVNYSANRHLGPDAAEERRPELLVSQVNCG
TGVNTMGTNQKRAATTSAQAVAVDEQVVGAVGGGGAKAEECPAATMAAED
GDKVESPSYCELDLDVASYGLAAAALSSFEAAACGYNSSRTSINNSTENL
SYASDNIYGDDIILLDDNDMNAEEISINSDDCVYAYRGEGADFDMNMDII
ATGRVGGQHFDLGRGPVNAMGGDSLIYGEDETEFLEMDFEPDPSSELELV
GGTTDMTIQPQANLLLMQRDYSQMNSIGGTTSTQEGKLHSSPIDDFPQED
LMQQQKLRLSKKFARISLNLDKIKDVGAGGSGVDIDLNELIVIGSEKQAE
SSGSFRSVKSYQAHSLPNTLHTGSNFSRSTSVPSEHPEPKLTGAKPKRFL
HTSSVMTKSSSYKSRRSHTSASFDERCYSCTDFRATTCQQQQSGSKSKQD
QVPPILVAPATVGALTTSSSCTGQFDLGITEENCLDCLEKEFLANTIGKV
VDPGTCPKCRRSAGSRGSSISLYSRSDQVRCRSGSPVYCYGGPFAGWHSL
IATGIVSGSNLGPPCNQRFISCDNSFNGLQLLNQGYLTEPLVASLSTGKT
CDEEHLVQALDKLRVPYDRELLHGYFKQLAKRRRTESSVNLKQLLIQASK
QQGNHRKLKRLIEMATHQQLIVQFKGKAADKTEWVPINVRDILNAWARCR
DLSLLQQLDDRFHCANVMGKVGHIVRQATVAASTQAQASSSTSFCKRTLP
EYLMIPQYYMSGVLTLTRKCASFLDH
BO34595.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:58:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3651-PD | 770 | CG3651-PD | 1..770 | 1..770 | 3997 | 100 | Plus |
| CG3651-PC | 770 | CG3651-PC | 1..770 | 1..770 | 3997 | 100 | Plus |
| CG3651-PB | 715 | CG3651-PB | 1..715 | 56..770 | 3702 | 100 | Plus |
