BO34652.complete Sequence
391 bp assembled on 2013-10-29
GenBank Submission: KX796418
> BO34652.complete
GAAGTTATCAGTCGACATGAGCAAAGCCAAGTCAACCGCCCACGAGCCGA
CGATCCACTACCTGGACAGCGTGCTGAGCGATGAGGAGAAGCGGTGCGCC
TATGGCCACCAGTGGCGCAACTTCTCCATCTCCCGATCCGGACGCTTTCG
TTCGAAGAACAAGAAGCGGGATGCGGTCGACGGAAAGTTCTTTGACGGAG
GATCTGGATCAGGATCTCTGCAGGACTTCGAGAAGGTCTCAAATTGCACT
TCGAAAAGCACAATATCCAAGTGCCTCGACCCTGCGACAGGACCGATGAC
GCCTGCAGCTAATCAGACAAGAAGCCAACGTGACCAGGTTGAGAGCTATA
AAAGTGTTTACGAAACGAATTTAGCAAGCTTTCTAGACCAT
BO34652.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:29:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34112-RB | 360 | CG34112-PB | 1..357 | 17..373 | 1785 | 100 | Plus |
CG34112-RD | 291 | CG34112-PD | 1..221 | 17..237 | 1105 | 100 | Plus |
CG34112-RC | 291 | CG34112-PC | 1..221 | 17..237 | 1105 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:29:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34112-RB | 970 | CG34112-RB | 213..570 | 16..373 | 1790 | 100 | Plus |
CG34112-RD | 1139 | CG34112-RD | 213..434 | 16..237 | 1110 | 100 | Plus |
CG34112-RC | 1094 | CG34112-RC | 213..434 | 16..237 | 1110 | 100 | Plus |
CG34112-RD | 1139 | CG34112-RD | 602..739 | 236..373 | 690 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:29:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 4393826..4394047 | 237..16 | 1110 | 100 | Minus |
3R | 32079331 | 3R | 4392111..4392251 | 373..233 | 705 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 14:29:55 has no hits.
BO34652.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-10-29 16:46:35 Download gff for
BO34652.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34112-RB | 214..570 | 17..375 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:15:19 Download gff for
BO34652.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34112-RB | 214..570 | 17..375 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:15:19 Download gff for
BO34652.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 4392109..4392248 | 236..375 | 98 | <- | Minus |
3R | 4393828..4394046 | 17..235 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-10-29 16:46:35 Download gff for
BO34652.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 217831..217970 | 236..375 | 98 | <- | Minus |
arm_3R | 219550..219768 | 17..235 | 100 | | Minus |
BO34652.pep Sequence
Translation from 16 to 391
> BO34652.pep
MSKAKSTAHEPTIHYLDSVLSDEEKRCAYGHQWRNFSISRSGRFRSKNKK
RDAVDGKFFDGGSGSGSLQDFEKVSNCTSKSTISKCLDPATGPMTPAANQ
TRSQRDQVESYKSVYETNLASFLDH
BO34652.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:53:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34112-PB | 119 | CG34112-PB | 1..119 | 1..119 | 626 | 100 | Plus |
CG34112-PD | 96 | CG34112-PD | 1..74 | 1..74 | 392 | 100 | Plus |
CG34112-PC | 96 | CG34112-PC | 1..74 | 1..74 | 392 | 100 | Plus |
CG34112-PA | 80 | CG34112-PA | 1..73 | 1..73 | 388 | 100 | Plus |