BO34703.complete Sequence
691 bp assembled on 2013-10-29
GenBank Submission: KX797835
> BO34703.complete
GAAGTTATCAGTCGACATGTGCTACGTTATTATCACCATCGCCAGTCTGG
TGTGGTTTCTCTGTTCGCTGGTGGCCGACATGCTCTTTGCTGTGGCCCTG
GTCACGCCCAGGTGGCTGGTGGGCCCCGCCCAAGGAACAGACTCCACCGC
CAGCTCTCACCACCAATCCTCGGTGGGCATCTACACGCGCTGCAAGGTCA
TGCAGGAGGGCGGATTCCAATGCGGCCGCTTCGACTTGGACGGACTGGCC
ACGGACAGTAGCGTTTACCCCAACGAATGGAAAGCGGCAATGTTCTTCGT
CATGCTGGGATTTAGTCTACTCTCTGTAACGGTGATCCTGACCCTGATCA
CCTGCTGCCGCCAGTCGGCCTGTGGCAAGAGCATACACAACATGACGGCC
TGCGCCCAGGTCGTAGCAGGAATATGTATGATGTTGGGTCTATTTCTGCA
TCCGATGGGATGGCGAGCGAACCGGATTCAACGTCTATGCGGCATGGATG
CCGAACCCTTTTACCCCGCCGACTGTAGCATAGGAGTTTCATTCTACTGC
GGAATCATTGGGGTACTCCTAACATTTACTGCCGCCGGTATAAGCCTAAA
GGCAGAGTCTTCCAATATGCGAACTCGAGTTCGCAGACGCGTGGAGGCGG
GCAGTAAACTGGTCTGTATTCCGGCAAGCTTTCTAGACCAT
BO34703.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:10:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3770-RB | 660 | CG3770-PB | 1..657 | 17..673 | 3270 | 99.8 | Plus |
| CG3770-RA | 660 | CG3770-PA | 1..657 | 17..673 | 3270 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:10:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3770-RB | 867 | CG3770-RB | 97..753 | 17..673 | 3270 | 99.8 | Plus |
| CG3770-RA | 1393 | CG3770-RA | 623..1279 | 17..673 | 3270 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:10:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 24945761..24946164 | 17..420 | 2005 | 99.8 | Plus |
| 2R | 25286936 | 2R | 24946381..24946522 | 532..673 | 710 | 100 | Plus |
| 2R | 25286936 | 2R | 24946217..24946333 | 418..534 | 585 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 14:10:05 has no hits.
BO34703.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-10-29 16:44:37 Download gff for
BO34703.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3770-RA | 623..1279 | 17..675 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:42:29 Download gff for
BO34703.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3770-RA | 623..1279 | 17..675 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:42:29 Download gff for
BO34703.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 24945761..24946163 | 17..419 | 99 | -> | Plus |
| 2R | 24946219..24946332 | 420..533 | 100 | -> | Plus |
| 2R | 24946383..24946522 | 534..675 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-10-29 16:44:37 Download gff for
BO34703.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 20833284..20833686 | 17..419 | 99 | -> | Plus |
| arm_2R | 20833742..20833855 | 420..533 | 100 | -> | Plus |
| arm_2R | 20833906..20834045 | 534..675 | 98 | | Plus |
BO34703.pep Sequence
Translation from 16 to 691
> BO34703.pep
MCYVIITIASLVWFLCSLVADMLFAVALVTPRWLVGPAQGTDSTASSHHQ
SSVGIYTRCKVMQEGGFQCGRFDLDGLATDSSVYPNEWKAAMFFVMLGFS
LLSVTVILTLITCCRQSACGKSIHNMTACAQVVAGICMMLGLFLHPMGWR
ANRIQRLCGMDAEPFYPADCSIGVSFYCGIIGVLLTFTAAGISLKAESSN
MRTRVRRRVEAGSKLVCIPASFLDH
BO34703.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:54:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3770-PB | 219 | CG3770-PB | 1..219 | 1..219 | 1154 | 100 | Plus |
| CG3770-PA | 219 | CG3770-PA | 1..219 | 1..219 | 1154 | 100 | Plus |
