BO34705.complete Sequence
1585 bp assembled on 2013-10-29
GenBank Submission: KX796411
> BO34705.complete
GAAGTTATCAGTCGACATGGACAAGTCTGATAAAACTGAGAAAACTGAGA
AATCCGATAAGTCTGAGAAGCCAGAGAAACCTCCCAAGATTGCAGGAAAC
TTCCTCTACATGTTCGAGTTCGTAGTGGACGATCTGCTGATCACACGCCA
GAATCTTTGCGCTCCGGAGGAGTATCCAACCTGCACAGAGATCACGTTCC
GCTCGTCGGTTTACGTGAATCTCTGCGATCGGGAGGTGGGCACGTGTGTT
AACCCCTGTTCGCCCAAGTGCGGCAAGTGCGCCCTCTTCACTCTGGACTC
CCCCATTACGGACAAGGATGTGCTGCAGGTGCATGTCTATAAGAAGCGCA
CGGAGAGCTGCAAGTTCCTGATAGGACTGTCGGAGCTAAAGGTGAAGCCC
ATCTTCGACAGGGTGAAGGAGTCCTTTGACATCGAGAATCCTGACTGGGA
AGACGCCATGCTGGGGCACATCGCCCAGCTGCCCAAGATGAAGGGTCCCA
CCAGCAAGGGCCTCCTGGACAACTGTGCCTGCTACGAGAAGCTGAACGAA
CGTCACGAGCAGTGGTGTCCCACATCGGAGTTGTCCAAGCGACTGCTGCC
CCTCTTCAATCTCTGCAAGATGCAGACTGGCAACATAGTGCTGATCCTTA
GATTGGTGTGCAATGGTCCGACCATTGTGTCCACGTTCCCCTTCAGCAAG
GTCTGCTCCCGCAATCCCAAGTGCCCGGAGCCCTGCTGCGGTCCTTGTGG
CCCCTGTGGTCCCTGCGGCCCCTGCCCACCACCTCCCAGCTGCGGCTCGT
GCCCACCGCCTCCTAGCTGTGGCCCACCATGTCCTCCACCCTGCGACCCC
TGCGATCCGTGCGATCCCTGCAGTCCCTGCTGTGGCGGCGGAACTGCCAC
CGGCGGGCCCATGGATAAGAAGGGCTGCAAGGGCTCGTGTGCCCAGCCTC
CTTGTCGTCGCTGTACAATGGTGGATCCTTGTGCCAAGCGAGTTGAGCCT
CCGGCAAAGTGCCTCAGGTACTACTCGTGCAATCTGGACAAGCTCTGTCC
CTGTGACTACTGCGAGGACGAGTTCGATAGAGAATGCCCCACTGTTCCCA
CAAAGCGTTGCAATCTCTCGCCGATCGAACAAAAGCTGCAGAAATGCGGT
CCCTGCGGCGGAATTCCACCGTACCCACGCTTCATCCAGGAGAAGATGCA
GGCCGAGCTCTTGAACAAACCGGAAAAGGATCCCAAGAAGGACAAGGATG
GCAAAAAGGGTGGCAAGGATGGAAAGGACGCAAAGGATGGAAAGGGTGGC
AAGGACGACAAGGGCAAGAAGAAGCGTCAGGCTGGAGGTGCTGTTTGCCG
CGTAGGAGACGAGAATAGTCCGTCCGCCGTCTACGAAGACTGCGATCCTG
TCTGCGCAGGAGTCCTCCAGGCGACCAAGAAAATTCGGTACAAGGAGCCC
ACTGTCAGGTGCAACGGACGGGAGGAGGAGTACGAAATGGCCTGTGATGA
AGCGCGAAAACGAGCTGTGCGGAAATTGCGCCACTTACTGGTGAAGTACA
ATATCCAAATTGAGAATGCAAGCTTTCTAGACCAT
BO34705.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:10:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9130-RB | 1554 | CG9130-PB | 1..1551 | 17..1567 | 7755 | 100 | Plus |
| CG9130-RA | 1554 | CG9130-PA | 1..1551 | 17..1567 | 7755 | 100 | Plus |
| CG9129-RA | 756 | CG9129-PA | 43..360 | 98..418 | 730 | 82.6 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:10:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9133-RD | 3109 | CG9133-RD | 156..1706 | 17..1567 | 7755 | 100 | Plus |
| CG9133-RC | 3036 | CG9133-RC | 156..1706 | 17..1567 | 7755 | 100 | Plus |
| CG9130-RB | 3109 | CG9130-RB | 156..1706 | 17..1567 | 7755 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:10:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 1252167..1253232 | 17..1082 | 5330 | 100 | Plus |
| 3L | 28110227 | 3L | 1253302..1253723 | 1081..1502 | 2110 | 100 | Plus |
| 3L | 28110227 | 3L | 1250919..1251236 | 98..418 | 730 | 82.6 | Plus |
| 3L | 28110227 | 3L | 1251334..1251478 | 522..666 | 350 | 82.8 | Plus |
| 3L | 28110227 | 3L | 1254074..1254140 | 1501..1567 | 335 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 14:10:10 has no hits.
BO34705.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-10-29 16:44:40 Download gff for
BO34705.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9130-RB | 156..1706 | 17..1569 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:42:30 Download gff for
BO34705.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9130-RB | 156..1706 | 17..1569 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:42:30 Download gff for
BO34705.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 1252167..1253232 | 17..1082 | 100 | -> | Plus |
| 3L | 1253304..1253723 | 1083..1502 | 100 | -> | Plus |
| 3L | 1254076..1254140 | 1503..1569 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-10-29 16:44:40 Download gff for
BO34705.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 1252167..1253232 | 17..1082 | 100 | -> | Plus |
| arm_3L | 1253304..1253723 | 1083..1502 | 100 | -> | Plus |
| arm_3L | 1254076..1254140 | 1503..1569 | 97 | | Plus |
BO34705.pep Sequence
Translation from 16 to 1585
> BO34705.pep
MDKSDKTEKTEKSDKSEKPEKPPKIAGNFLYMFEFVVDDLLITRQNLCAP
EEYPTCTEITFRSSVYVNLCDREVGTCVNPCSPKCGKCALFTLDSPITDK
DVLQVHVYKKRTESCKFLIGLSELKVKPIFDRVKESFDIENPDWEDAMLG
HIAQLPKMKGPTSKGLLDNCACYEKLNERHEQWCPTSELSKRLLPLFNLC
KMQTGNIVLILRLVCNGPTIVSTFPFSKVCSRNPKCPEPCCGPCGPCGPC
GPCPPPPSCGSCPPPPSCGPPCPPPCDPCDPCDPCSPCCGGGTATGGPMD
KKGCKGSCAQPPCRRCTMVDPCAKRVEPPAKCLRYYSCNLDKLCPCDYCE
DEFDRECPTVPTKRCNLSPIEQKLQKCGPCGGIPPYPRFIQEKMQAELLN
KPEKDPKKDKDGKKGGKDGKDAKDGKGGKDDKGKKKRQAGGAVCRVGDEN
SPSAVYEDCDPVCAGVLQATKKIRYKEPTVRCNGREEEYEMACDEARKRA
VRKLRHLLVKYNIQIENASFLDH
BO34705.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:54:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9130-PB | 517 | CG9130-PB | 1..517 | 1..517 | 2934 | 100 | Plus |
| CG9130-PA | 517 | CG9130-PA | 1..517 | 1..517 | 2934 | 100 | Plus |
| CG9129-PA | 251 | CG9129-PA | 2..243 | 15..282 | 891 | 61.6 | Plus |
| Mst84Db-PA | 74 | CG17934-PA | 14..66 | 239..290 | 205 | 65.5 | Plus |
| Mst84Db-PA | 74 | CG17934-PA | 2..72 | 240..313 | 204 | 51.9 | Plus |
| Mst98Ca-PA | 334 | CG11719-PA | 172..311 | 236..387 | 199 | 34.8 | Plus |
| Mst84Db-PA | 74 | CG17934-PA | 9..73 | 230..290 | 157 | 46.7 | Plus |
