Clone BO34710 Report

Search the DGRC for BO34710

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:347
Well:10
Vector:pDNR-Dual
Associated Gene/TranscriptCG9302-RA
Protein status:BO34710.pep: Imported from assembly
Sequenced Size:1564

Clone Sequence Records

BO34710.complete Sequence

1564 bp assembled on 2014-03-03

GenBank Submission: KX795708

> BO34710.complete
GAAGTTATCAGTCGACATGTGGATAACCGGTCAGTTTGTTTTTCTTCTGC
TGGTGGCACTTGTTGCCGCAAAATCGAAAACCTCGGCGGTGCAGGATGAC
ATCGCGGAGTATAAGGACTTCAAGAAGCTGCTGCGCACCAAGAACAATGT
CCTCGCGCTCTACGTGACCAGTGCGAAATCCGCTGCTGCTGAGCTAAAGA
TATTCCGTGAGGCGGCGGAGGCGATACGGGGAACCGGGACAATGTTGCTG
CTAGATTGCGGACAGCAGGATCGCAAGAAACTGTGCAAGAAGTTGAAGGT
ATCGCCGGACCCCTACGCCATTAAACACTACAAGGATGGCGACTTCCACA
AGGACTACGACCGGCAGCTGAGCGTCAGCTCCATGATCACTTTCATGCGT
GATCCCTCCGGCGATTTGCCCTGGGAGGAGGATCCAGCCGGCAAGGATGT
CCTGCACTTCAGCGATGCCGCATCCTTCACAAAGCATTTACGCAAGGATA
TCCGGCCCATGCTTGTCATGTTCTATGTTCCGTGGTGCGGATTCTGCAAG
AAAATGAAGCCGGAGTACGGAAAAGCGTCCACGGAGTTGAAAACTAAGGG
CGGTTATATTCTGGCGGCTATGAATGTAGAGCGACAGGAGAACGCTCCTA
TACGCAAAATGTTCAACATAACTGGTTTTCCCACCCTGATTTACTTTGAA
AATGGCAAGCTGCGCTTTACATACGAAGGAGAGAACAACAAGGAGGCTTT
GGTGTCTTTTATGCTCAATCCAAATGCCAAGCCAACGCCAAAGCCCAAGG
AACCCGAATGGTCGGCGGATACCAACTCGGAGATTGTCCATCTCACCTCG
CAGGGTTTTGAGCCCGCTCTGAAGGACGAGAAGTCCGCCCTGGTCATGTT
CTATGCACCCTGGTGCGGACACTGTAAGCGCATGAAACCGGAATACGAAA
AGGCCGCTCTGGAGATGAAGCAGAAAAAGATTCCCGGCCTTTTGGCTGCG
TTGGATGCAACGAAGGAGCCGTCAATCGCAGAGAAATATAAAGTCAAGGG
CTATCCAACTGTTAAGTTTTTCTCGAATGGCGTCTTTAAGTTTGAAGTAA
ATGTACGCGAAGCATCGAAAATTGTTGAATTTATGAGAGATCCCAAGGAG
CCCCCACCGCCTCCGCCACCCGAAAAGAGTTGGGAGGAGGAGGAGGACAG
CAAGGAAGTCCTATTTCTGGATGACGACAACTTCAGTTCGACGCTGAAGA
GGAAAAAGCATGCGCTGGTCATGTTCTATGCACCCTGGTGTGGACACTGT
AAGCACACAAAACCGGAGTTTACAGCGGCTGCCACGGCCTTACAGGATGA
TCCTCGGATAGCGTTTGTCGCCATCGACTGCACAAAGCTTGCCGCGCTCT
GCGCAAAGTATAACGTACGCGGATATCCCACCATTCTGTACTTCTCTTAC
CTCAAAACCAAGCTGGATTACAATGGCGGACGCACCAGCAAGGACTTTAT
CGCCTATATGAACAACCCGCCTACCTCAGCGGACCGCACAGAGCTGGCAA
GCTTTCTAGACCAT

BO34710.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:58:47
Subject Length Description Subject Range Query Range Score Percent Strand
CG9302-RA 1533 CG9302-PA 1..1530 17..1546 7575 99.7 Plus
CG9302-RA 1533 CG9302-PA 874..926 1265..1317 205 92.5 Plus
CG9302-RA 1533 CG9302-PA 1249..1301 890..942 205 92.5 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:58:48
Subject Length Description Subject Range Query Range Score Percent Strand
CG9302-RA 1972 CG9302-RA 182..1711 17..1546 7575 99.7 Plus
CG9302-RA 1972 CG9302-RA 1055..1107 1265..1317 205 92.5 Plus
CG9302-RA 1972 CG9302-RA 1430..1482 890..942 205 92.5 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:58:46
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 13377698..13378357 676..17 3255 99.5 Minus
2L 23513712 2L 13377038..13377651 1287..674 3040 99.7 Minus
2L 23513712 2L 13376716..13376975 1546..1287 1300 100 Minus
2L 23513712 2L 13377383..13377435 1317..1265 205 92.5 Minus
Blast to na_te.dros performed on 2014-11-28 14:58:47 has no hits.

BO34710.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-03-03 17:23:47 Download gff for BO34710.complete
Subject Subject Range Query Range Percent Splice Strand
CG9302-RA 182..1711 17..1548 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:28:23 Download gff for BO34710.complete
Subject Subject Range Query Range Percent Splice Strand
CG9302-RA 182..1711 17..1548 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:28:23 Download gff for BO34710.complete
Subject Subject Range Query Range Percent Splice Strand
2L 13376713..13376975 1287..1548 99 <- Minus
2L 13377039..13377650 675..1286 99 <- Minus
2L 13377700..13378357 17..674 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2014-03-03 17:23:47 Download gff for BO34710.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 13376713..13376975 1287..1548 99 <- Minus
arm_2L 13377039..13377650 675..1286 99 <- Minus
arm_2L 13377700..13378357 17..674 99   Minus

BO34710.pep Sequence

Translation from 16 to 1564

> BO34710.pep
MWITGQFVFLLLVALVAAKSKTSAVQDDIAEYKDFKKLLRTKNNVLALYV
TSAKSAAAELKIFREAAEAIRGTGTMLLLDCGQQDRKKLCKKLKVSPDPY
AIKHYKDGDFHKDYDRQLSVSSMITFMRDPSGDLPWEEDPAGKDVLHFSD
AASFTKHLRKDIRPMLVMFYVPWCGFCKKMKPEYGKASTELKTKGGYILA
AMNVERQENAPIRKMFNITGFPTLIYFENGKLRFTYEGENNKEALVSFML
NPNAKPTPKPKEPEWSADTNSEIVHLTSQGFEPALKDEKSALVMFYAPWC
GHCKRMKPEYEKAALEMKQKKIPGLLAALDATKEPSIAEKYKVKGYPTVK
FFSNGVFKFEVNVREASKIVEFMRDPKEPPPPPPPEKSWEEEEDSKEVLF
LDDDNFSSTLKRKKHALVMFYAPWCGHCKHTKPEFTAAATALQDDPRIAF
VAIDCTKLAALCAKYNVRGYPTILYFSYLKTKLDYNGGRTSKDFIAYMNN
PPTSADRTELASFLDH

BO34710.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:58:45
Subject Length Description Subject Range Query Range Score Percent Strand
CG9302-PA 510 CG9302-PA 1..510 1..510 2710 100 Plus
prtp-PC 416 CG1837-PC 56..407 165..498 325 25.1 Plus
prtp-PB 416 CG1837-PB 56..407 165..498 325 25.1 Plus
prtp-PA 416 CG1837-PA 56..407 165..498 325 25.1 Plus
prtp-PC 416 CG1837-PC 10..274 244..502 317 29.9 Plus
prtp-PB 416 CG1837-PB 10..274 244..502 317 29.9 Plus
prtp-PA 416 CG1837-PA 10..274 244..502 317 29.9 Plus
CaBP1-PB 433 CG5809-PB 27..263 273..500 305 31.4 Plus
prtp-PC 416 CG1837-PC 175..388 153..355 218 26.5 Plus
prtp-PB 416 CG1837-PB 175..388 153..355 218 26.5 Plus
prtp-PA 416 CG1837-PA 175..388 153..355 218 26.5 Plus