BO34711.complete Sequence
1396 bp assembled on 2013-10-29
GenBank Submission: KX798656
> BO34711.complete
GAAGTTATCAGTCGACATGGACTTAGGAGCTTATAAATTGAGTGAATACA
TCCCCGCCAAGCCGCTGGTCGGTAATCTGGAGTTGTGTTTCACGGACGAA
GAGCAGAGACCCACCGAAACATGCGGCCAACTTAAATGCTGCGATATTTT
AAAGTTCCCATTCGCCCGCCCTGATTTCCAGCCAAGTTCAGTGGAGATAA
AGGAGAGCAAGGTGCTCGTGTCTGCTGATAAGGCTACAGAGACAAAACGC
GTGGTGGAGCTGACTCTGGAGTCCACGTTCGATTACCAGCCCGGGGATAC
CATTGGAATTTTGCCTGCTAATAAACTCGAACAAGTGGAAAGTCTGCTCC
ATCGGCTGGAACTGTTAGACCAGGCCGACACCACTTGCCACTTAAAGTTG
GTGTTCAACTGCGCCAATAAGAATGCTAAGCTACCCGCCCACATTCCAGC
AACTACTACTCCCCGGGAGATCCTTACCCACTGCCTCTCCCTTAATTTTG
TTCCGCAGAAGCAGCTCCTCAGCGCCCTGGCCGGATTTACAAGCGATGAC
AAAGAGCGTTGTTTCCTGTCCTGTCTGTCCTCTAAACAGGCCACCGAGTA
CTACCAATCGCTGATATTAGAGCAAGGCCTGCTTTTCATAGACATTCTTG
AAGTGTGCGTCAACTGCAGGCCACCACTGGCATTCCTGGCAGAGCACTTG
CCACGGCTGCTGCCGCGACCGTACTCCATTGCCAACAGTCCCTTGGAGGC
TAGTAATCGCGAACTTCGCGTTATCTACTCGCTGCTCAGCCTCAAACCTG
GAGTCACAACCAGCATGTTGGAGGCGGCTGCACAGCAAAGCAGTCCGGAG
CATTCCAAAAAAGTAGTTATCTACCCACGAATGAGCAACCTATTCCGTTA
CACAGAGCGGGATGTGGGCAGAAACCAAATACTTATTGCTGTTGGCACAG
GTCTGGCGCCTTTTCTTGGATTCTTAGCCCACAAGGAAGAGCTTATAAAA
CAGCAGCCGCAACAGCCAAGCGGGCAATCCTGGCTCTACATTGGTGCCAA
GACCCCAGAAGCAGTTCTTAAGCGTGAAAAACTAATGGAGTGGCAGGAAT
CTTCGTTGCTCGAGCGCCTACGGATGTGTTACTCGCGAGGCGAATCCCCC
AGCTACGTGCAACATATGTTGGAGGAGGACTGTGAGGATCTGGTCGAGTT
CCTGATGAAGTCAGAGACTGTGTTGTACATTTGTGCCGATGGCGCCAAGA
TTTCGCAGTCCATTGCAGGTGTTTTAAGTCGTTGCTTGCAGAAGGCTATG
CATCTCACTGAAGAAGAAGCTTCGCAGCTGTTAAAAAAACTGAGGAAGCA
GGACAAATACCGCGAGGATGTTTGGCTGGCAAGCTTTCTAGACCAT
BO34711.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:09:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14882-RB | 1365 | CG14882-PB | 1..1362 | 17..1378 | 6810 | 100 | Plus |
| CG14882-RA | 1365 | CG14882-PA | 1..1362 | 17..1378 | 6810 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:09:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14882-RB | 1754 | CG14882-RB | 82..1443 | 17..1378 | 6810 | 100 | Plus |
| CG14882-RA | 1511 | CG14882-RA | 45..1406 | 17..1378 | 6810 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:09:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 16443426..16444699 | 105..1378 | 6370 | 100 | Plus |
| 3R | 32079331 | 3R | 16443288..16443377 | 17..106 | 450 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 14:09:55 has no hits.
BO34711.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-10-29 16:44:33 Download gff for
BO34711.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14882-RA | 45..1406 | 17..1380 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:42:26 Download gff for
BO34711.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14882-RA | 45..1406 | 17..1380 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:42:26 Download gff for
BO34711.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 16443288..16443377 | 17..106 | 100 | -> | Plus |
| 3R | 16443428..16444699 | 107..1380 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-10-29 16:44:33 Download gff for
BO34711.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 12269010..12269099 | 17..106 | 100 | -> | Plus |
| arm_3R | 12269150..12270421 | 107..1380 | 99 | | Plus |
BO34711.pep Sequence
Translation from 16 to 1396
> BO34711.pep
MDLGAYKLSEYIPAKPLVGNLELCFTDEEQRPTETCGQLKCCDILKFPFA
RPDFQPSSVEIKESKVLVSADKATETKRVVELTLESTFDYQPGDTIGILP
ANKLEQVESLLHRLELLDQADTTCHLKLVFNCANKNAKLPAHIPATTTPR
EILTHCLSLNFVPQKQLLSALAGFTSDDKERCFLSCLSSKQATEYYQSLI
LEQGLLFIDILEVCVNCRPPLAFLAEHLPRLLPRPYSIANSPLEASNREL
RVIYSLLSLKPGVTTSMLEAAAQQSSPEHSKKVVIYPRMSNLFRYTERDV
GRNQILIAVGTGLAPFLGFLAHKEELIKQQPQQPSGQSWLYIGAKTPEAV
LKREKLMEWQESSLLERLRMCYSRGESPSYVQHMLEEDCEDLVEFLMKSE
TVLYICADGAKISQSIAGVLSRCLQKAMHLTEEEASQLLKKLRKQDKYRE
DVWLASFLDH
BO34711.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:54:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14882-PB | 454 | CG14882-PB | 1..454 | 1..454 | 2339 | 100 | Plus |
| CG14882-PA | 454 | CG14882-PA | 1..454 | 1..454 | 2339 | 100 | Plus |
| Cpr-PB | 550 | CG11567-PB | 178..549 | 80..453 | 408 | 31.4 | Plus |
| Cpr-PD | 679 | CG11567-PD | 307..678 | 80..453 | 408 | 31.4 | Plus |
| Cpr-PC | 679 | CG11567-PC | 307..678 | 80..453 | 408 | 31.4 | Plus |
