BO34712.complete Sequence
2083 bp assembled on 2014-07-07
GenBank Submission: KX797024
> BO34712.complete
GAAGTTATCAGTCGACATGGCCGACAAGAAGAATCTGCTCCTTCTGTTCG
ATCATCCCACGGAGCCCGTGTTCATGGACAAGGGTGGCAATGGCACCGTC
TTCGACGTGCCCGACTCCTACGTGACCGATCGCTACAACCAGATGTGCAA
GAAGGTCCAGCGGCGCGTGAGCAGCGCGTCCGAGAAGAACGTCCAGGTCA
AGGAGATCGCCATACCGGATCTCAGTTGCTCCATGAGACTGGGCCGCTCG
GAGCAGTTCTCGATCTTCCTGAAGTCCCACCGCAAGATGGCCAGCCACCT
AATCGAGATCTTCACCAAAATGCAGACCGTGGATGAGCTGCAGAGCGTGG
CGGTGTACGCCAGGGATCGCGTCAATCCGGTGCTCTTCAACTACGCCTTG
TCGGTGGCCCTGCTCCACCGTCCGGACACCAAGGATCTCGAACTGCCCGC
CTTCGCGCAGACCTTCCCGGATCGCTTCATCGACTCGAAGATGCTTCGCA
GCATGCGCGAGGAGTCCTTTGTGGTGGAGCGCTCCGCCGCCCGCCTGCCC
GTCGTCAGTTCGGTCAAGTACACCGCCTCCGATCTCGATGTGGAGCACCG
GCTGTGGTATTTCCGCGAGGACCTGGGCGTCAACCTGCACCACTGGCACT
GGCATCTGGTCTATCCCATCGAGGCGCCCGACCGCAGCATCGTGGACAAG
GACCGTCGTGGCGAGCTGTTCTACTATATGCACCAGCAGATCATTGCCCG
CTACAATGCCGAGCGGCTGAGCAACCACATGGCCCGGGTGCAGCCGTTCA
ACAACCTGGACGAACCCATTGCCGAGGGCTACTTCCCCAAGATGGACTCG
CTGGTGGCCAGTAGGGCGTATCCTCCGCGCTTCGACAACACCCGGCTGAG
CGACGTGGACCGGCCCAACAACCAGTTGAGGGTTGGCATCGATGATATGA
AGCGCTGGCGCGAACGCATCTACGAGGCCATCCATCAGGGCTACGTTTTG
GATACGAACAATGAAAAGATCGTGCTGGATGACGCTAAGGGCATCGACAT
CCTGGGCAACATCATCGAGGCTTCCGATCTGACGCCCAACAGTACGCTGT
ACGGCGACTTCCACAACATGGGGCACATACTGATTGCCTACTCACACGAT
CCGACCAACAAGCACCTGGAGTACGCGGGCGTGATGGGCGACGCCTCCAC
CGCGATGCGCGATCCGATCTTCTACAAGTGGCACGCCTTCATCGACAATA
TGTTCCAGGAGCACAAACGTCTGCTTTCTCCCTATGAGAAGCAAGAGCTC
AGCTTTCCGGACGTTCGCGTCGAGAGCATCCAGGTGGAGAGCCAGGGTCA
GGTCAACAGGCTAACCACCTTCTGGCAGGAGTCCGATGTGGACATGTCCC
GTGGCCTTGATTTTGTGCCGCGCGGCCATGTCCTCGCTCGGTTCACCCAT
CTGCAGCACCACGAATTCAGCTACACCATCAAGGTGGAGAACTCCAGCGA
GGCCACGCGGTATGGCTACGTGCGCATCTTCCTGGCGCCCAAGCTGGATG
ATCGCAATGCACCCATGCTGCTGGAGCAACAGCGCCTGATGATGGTGGAG
CTGGACAAGTTCGTGGTTACCATGCCTCCCGGCAGCCATACGATCACCCG
GAACTCCACGGAGTCGAGTGTCACCATTCCGTTCGAGCGCACCTTCCGCA
ACCTGGACAAGCTGGAGGAGCTGCAGAACTTCTTGTGCGGCTGCGGTTGG
CCCCAGCACATGCTGATTCCGAAGGGTCGGCCCGAGGGTCTGCGCTTCGA
GCTCTTCGTCATGGTTTCCAACTACGAAGAGGATAAGGTTGACCAGACGG
TCGCAGATTGCGGCTGCAGCATCGCCGCTTCCTACTGCGGCCTGCGCGAT
CGCCTCTATCCGGATCGCAAGTCCATGGGCTTCCCCTTCGATCGCAAGCC
GCGTCGAGGCTCCGAGATCCTGGAGAACTTCCTGACGCCCAACATGTGCG
CCGTGGAGGTCATCATTACCCACGAGGACCGCACCGAGAAGCTTCGCGAG
GTACCAGCTCGCTCCGCAAGCTTTCTAGACCAT
BO34712.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 15:08:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| PPO3-RA | 2052 | CG42640-PA | 1..2049 | 17..2065 | 10035 | 99.3 | Plus |
| PPO2-RA | 2055 | CG8193-PA | 1..2038 | 17..2036 | 2295 | 74.6 | Plus |
| PPO1-RA | 2073 | CG42639-PA | 686..755 | 696..765 | 200 | 85.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:08:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| PPO3-RA | 2228 | CG42640-RA | 61..2109 | 17..2065 | 10035 | 99.3 | Plus |
| PPO2-RA | 2280 | CG8193-RA | 90..2127 | 17..2036 | 2295 | 74.6 | Plus |
| PPO1-RA | 2338 | CG42639-RA | 759..828 | 696..765 | 200 | 85.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 15:08:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 23064829..23065815 | 17..1003 | 4740 | 98.7 | Plus |
| 2R | 25286936 | 2R | 23066036..23066776 | 1099..1839 | 3690 | 99.9 | Plus |
| 2R | 25286936 | 2R | 9043659..9044620 | 981..17 | 1790 | 79.3 | Minus |
| 2R | 25286936 | 2R | 23066835..23067064 | 1836..2065 | 1150 | 100 | Plus |
| 2R | 25286936 | 2R | 9042817..9043382 | 1707..1145 | 530 | 73.3 | Minus |
| 2R | 25286936 | 2R | 23065880..23065975 | 1004..1099 | 480 | 100 | Plus |
| 2R | 25286936 | 2R | 9042414..9042576 | 2036..1874 | 245 | 76.7 | Minus |
| 2R | 25286936 | 2R | 9042679..9042789 | 1824..1714 | 225 | 80.2 | Minus |
| 2R | 25286936 | 2R | 17889020..17889089 | 765..696 | 200 | 85.7 | Minus |
Blast to na_te.dros performed on 2014-11-28 15:08:49 has no hits.
BO34712.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-07-07 10:51:18 Download gff for
BO34712.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| proPO59-RA | 61..2109 | 17..2067 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:32:23 Download gff for
BO34712.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| PPO3-RA | 61..2109 | 17..2067 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:32:23 Download gff for
BO34712.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 23066837..23067064 | 1838..2067 | 99 | | Plus |
| 2R | 23064829..23065815 | 17..1003 | 98 | -> | Plus |
| 2R | 23065880..23065975 | 1004..1099 | 100 | -> | Plus |
| 2R | 23066037..23066774 | 1100..1837 | 99 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-07-07 10:51:18 Download gff for
BO34712.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 18952352..18953338 | 17..1003 | 98 | -> | Plus |
| arm_2R | 18953403..18953498 | 1004..1099 | 100 | -> | Plus |
| arm_2R | 18953560..18954297 | 1100..1837 | 99 | -> | Plus |
| arm_2R | 18954360..18954587 | 1838..2067 | 99 | | Plus |
BO34712.pep Sequence
Translation from 16 to 2083
> BO34712.pep
MADKKNLLLLFDHPTEPVFMDKGGNGTVFDVPDSYVTDRYNQMCKKVQRR
VSSASEKNVQVKEIAIPDLSCSMRLGRSEQFSIFLKSHRKMASHLIEIFT
KMQTVDELQSVAVYARDRVNPVLFNYALSVALLHRPDTKDLELPAFAQTF
PDRFIDSKMLRSMREESFVVERSAARLPVVSSVKYTASDLDVEHRLWYFR
EDLGVNLHHWHWHLVYPIEAPDRSIVDKDRRGELFYYMHQQIIARYNAER
LSNHMARVQPFNNLDEPIAEGYFPKMDSLVASRAYPPRFDNTRLSDVDRP
NNQLRVGIDDMKRWRERIYEAIHQGYVLDTNNEKIVLDDAKGIDILGNII
EASDLTPNSTLYGDFHNMGHILIAYSHDPTNKHLEYAGVMGDASTAMRDP
IFYKWHAFIDNMFQEHKRLLSPYEKQELSFPDVRVESIQVESQGQVNRLT
TFWQESDVDMSRGLDFVPRGHVLARFTHLQHHEFSYTIKVENSSEATRYG
YVRIFLAPKLDDRNAPMLLEQQRLMMVELDKFVVTMPPGSHTITRNSTES
SVTIPFERTFRNLDKLEELQNFLCGCGWPQHMLIPKGRPEGLRFELFVMV
SNYEEDKVDQTVADCGCSIAASYCGLRDRLYPDRKSMGFPFDRKPRRGSE
ILENFLTPNMCAVEVIITHEDRTEKLREVPARSASFLDH
BO34712.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 10:06:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| PPO3-PA | 683 | CG2952-PA | 1..683 | 1..683 | 3603 | 100 | Plus |
| PPO2-PA | 684 | CG8193-PA | 1..679 | 1..673 | 2472 | 68 | Plus |
| PPO1-PA | 690 | CG42639-PA | 5..685 | 3..672 | 1656 | 47.7 | Plus |
| Lsp2-PB | 701 | CG6806-PB | 97..695 | 81..671 | 490 | 25.5 | Plus |
| Lsp2-PA | 701 | CG6806-PA | 97..695 | 81..671 | 490 | 25.5 | Plus |
