Clone BO34714 Report

Search the DGRC for BO34714

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:347
Well:14
Vector:pDNR-Dual
Associated Gene/TranscriptCG11864-RA
Protein status:BO34714.pep: Imported from assembly
Sequenced Size:787

Clone Sequence Records

BO34714.complete Sequence

787 bp assembled on 2013-10-29

GenBank Submission: KX799691

> BO34714.complete
GAAGTTATCAGTCGACATGTTTCCGCAGATATGGGGTGTGATTTTTTTGT
TCACTCCTACTGTTTTTAGTGAACTCTTTAAGGATCCGGAGCTGCTTGCC
GGATTTTATCAGGGGGACATAAAAGCTCATCCAATTCGTACTCGAAACGG
AATTGTCAATCAGATTTATCACTGGCCCAATCGCACTGTACCATATATGA
TTGAAGATGATGCATTTGCCGACAGTCATTATCGGGAAATTCTTAGAGCC
ATTTCCATCATAGAGGAAAACTCATGCGTTATTTTCAAGCCAGCTACTGA
AATGGATTTTCCCATGGCGCTCGTCATTACGTCAAAAGGTTTGGGCTGCA
ATACCGTTCACTTGGGCTATAGGAATAAGACACAAGTGGTAAATCTGGAG
ATTTACCCACTTGGCGAAGGCTGCTTTCGCATCGGTTCCATTATCCACGA
GCTCCTTCACGTTTTGGGCTTCGAACATCAGCATGTGTCCCAAAATCGGG
ACCAATACGTCAGCATCCAGTGGAAAAATATAAATCCGCAGTACAATATC
AATTTCGTGAACAACGATAATTCTACAGCGTGGCACGACTTTGACGAAGG
CTACGATTATGAAAGTGTTATGCACTATGTGCCAAGGGCCTTTTCCAGGA
ATGGCCAACCCACAATTGTGCCCCTCCGCGAAGGAGCCGAAAATATGGGG
CAACGATTTTATATGAGCGAAAAGGATATTCGCAAGTTGAACAAAATGTA
TAGATGCCCTGATCATGTTGCAAGCTTTCTAGACCAT

BO34714.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:10:33
Subject Length Description Subject Range Query Range Score Percent Strand
Semp1-RA 756 CG11864-PA 1..753 17..769 3750 99.9 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:10:34
Subject Length Description Subject Range Query Range Score Percent Strand
Semp1-RA 789 CG11864-RA 9..762 16..769 3755 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:10:32
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 15612521..15613072 769..218 2745 99.8 Minus
2L 23513712 2L 15613125..15613327 218..16 1015 100 Minus
Blast to na_te.dros performed on 2014-11-28 14:10:33 has no hits.

BO34714.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-10-29 16:44:47 Download gff for BO34714.complete
Subject Subject Range Query Range Percent Splice Strand
CG11864-RA 16..762 23..771 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:42:37 Download gff for BO34714.complete
Subject Subject Range Query Range Percent Splice Strand
Semp1-RA 16..762 23..771 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:42:37 Download gff for BO34714.complete
Subject Subject Range Query Range Percent Splice Strand
2L 15612519..15613071 219..771 99 <- Minus
2L 15613125..15613320 23..218 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-10-29 16:44:47 Download gff for BO34714.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 15612519..15613071 219..771 99 <- Minus
arm_2L 15613125..15613320 23..218 100   Minus

BO34714.pep Sequence

Translation from 16 to 787

> BO34714.pep
MFPQIWGVIFLFTPTVFSELFKDPELLAGFYQGDIKAHPIRTRNGIVNQI
YHWPNRTVPYMIEDDAFADSHYREILRAISIIEENSCVIFKPATEMDFPM
ALVITSKGLGCNTVHLGYRNKTQVVNLEIYPLGEGCFRIGSIIHELLHVL
GFEHQHVSQNRDQYVSIQWKNINPQYNINFVNNDNSTAWHDFDEGYDYES
VMHYVPRAFSRNGQPTIVPLREGAENMGQRFYMSEKDIRKLNKMYRCPDH
VASFLDH

BO34714.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:42:11
Subject Length Description Subject Range Query Range Score Percent Strand
Semp1-PA 251 CG11864-PA 1..251 1..251 1367 100 Plus
CG15254-PB 254 CG15254-PB 10..254 8..251 551 48.4 Plus
CG15254-PA 254 CG15254-PA 10..254 8..251 551 48.4 Plus
CG15255-PB 261 CG15255-PB 28..258 23..248 468 43.6 Plus
CG15255-PA 261 CG15255-PA 28..258 23..248 468 43.6 Plus