BO34715.complete Sequence
796 bp assembled on 2013-10-29
GenBank Submission: KX797650
> BO34715.complete
GAAGTTATCAGTCGACATGAAACTCGCTTCGCAATTTTGGCACACAGTCT
GCCGTCATTATCGCACAAGTCGTTGGTTGCATATTCCGCCAGTTGAAAAG
AGTGAATCAAATGACCAATTGAGGGACAAACTCGAGTACACTGAAGAGGT
AATAAAACGCGCCATGACTTTGTATAAGCCAAATGAGATGATGCTGTCCT
TTAATGGTGGCAAGGATTGCACAGTCTTGCTGGATATTTTGGCCAGGATG
ACGCCACCCTCGATGCCACTGGGAGCGGTTTACGTGAAGTCTGCAAATCC
ATTCGAGGAGCTGGAGAAGTTCGTGGATGATTGTGTACAGCGCTATGGAC
TACAGCTGAGGCGATACGAAGGAGTGCTTAAGGTTGCCTTTGAGCAGCTG
ATAGCCGAGGATTCCCAGGTGAAGGCCATCTTCCTCGGCTGCCGGCGCAG
CGATCCTGAAAGCTGCAATCTATACGAGCTGGAACCTACCAACAACGGAT
GGCCAGCGATGATGCGGATCTTCCCGCTGCTTGAGTGGAGCTACCACGAC
ATTTGGAACTATTTGCGCTCAAACAATCTGCCCTACTGCTGCCTCTACGA
TCAGGGCTACACATCTTTGGGAGATCGCAGCTCAACGCGGGTCAATCCTA
GTCTGCTGGCTTACGACGAAAAGCTGGACAAGATGACCTATCGACCGGCC
TACGAATTGGAGAATGTGCGTCTTGAGCGGTTCAACAGGGATGAGCATGG
CCAGGCCTCAGTCAGCGGATCCAAACAAGCAAGCTTTCTAGACCAT
BO34715.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:10:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG16848-RA | 765 | CG16848-PA | 1..762 | 17..778 | 3735 | 99.3 | Plus |
| CG4407-RB | 885 | CG4407-PB | 587..707 | 492..612 | 185 | 76.9 | Plus |
| CG4407-RA | 969 | CG4407-PA | 671..791 | 492..612 | 185 | 76.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:10:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG16848-RA | 1198 | CG16848-RA | 75..836 | 17..778 | 3735 | 99.3 | Plus |
| CG4407-RB | 1235 | CG4407-RB | 744..864 | 492..612 | 185 | 76.9 | Plus |
| CG4407-RA | 1338 | CG4407-RA | 847..967 | 492..612 | 185 | 76.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:10:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 13412593..13413354 | 17..778 | 3735 | 99.3 | Plus |
| X | 23542271 | X | 12901724..12901844 | 612..492 | 185 | 76.9 | Minus |
Blast to na_te.dros performed on 2014-11-28 14:10:36 has no hits.
BO34715.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-10-29 16:44:48 Download gff for
BO34715.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16848-RA | 75..836 | 17..780 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:42:39 Download gff for
BO34715.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16848-RA | 75..836 | 17..780 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:42:39 Download gff for
BO34715.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 13412593..13413354 | 17..780 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-10-29 16:44:48 Download gff for
BO34715.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 13412593..13413354 | 17..780 | 99 | | Plus |
BO34715.pep Sequence
Translation from 16 to 796
> BO34715.pep
MKLASQFWHTVCRHYRTSRWLHIPPVEKSESNDQLRDKLEYTEEVIKRAM
TLYKPNEMMLSFNGGKDCTVLLDILARMTPPSMPLGAVYVKSANPFEELE
KFVDDCVQRYGLQLRRYEGVLKVAFEQLIAEDSQVKAIFLGCRRSDPESC
NLYELEPTNNGWPAMMRIFPLLEWSYHDIWNYLRSNNLPYCCLYDQGYTS
LGDRSSTRVNPSLLAYDEKLDKMTYRPAYELENVRLERFNRDEHGQASVS
GSKQASFLDH
BO34715.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:42:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG16848-PA | 254 | CG16848-PA | 1..254 | 1..254 | 1366 | 100 | Plus |
| CG4407-PB | 294 | CG4407-PB | 83..290 | 50..241 | 471 | 43.3 | Plus |
| CG4407-PA | 322 | CG4407-PA | 111..318 | 50..241 | 471 | 43.3 | Plus |
