Clone BO34716 Report

Search the DGRC for BO34716

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:347
Well:16
Vector:pDNR-Dual
Associated Gene/TranscriptCG13526-RA
Protein status:BO34716.pep: Imported from assembly
Sequenced Size:496

Clone Sequence Records

BO34716.complete Sequence

496 bp assembled on 2013-10-29

GenBank Submission: KX796736

> BO34716.complete
GAAGTTATCAGTCGACATGCCTTCTTTTTCCGGCAATGAGCTGACGAATG
AGCATATCGACGAACTGAGGGATGCCTTTGAAAAGTATGATCTGGACTCG
AATGGCACTCTATCAGCCAACGAGGTGCGACTGGCTCTAATATCAGTGGG
TTACGAAATCACTGAGGCAGAGTTGTACGATCTCATCCATTCGGTGGCTG
TGAGAGACGAGGAGAGGCTGGACTTGAAAAAATTTATACGCATGATGGCG
CCCCGAATGGCCAATGTGGATAGTGATAAAAGTCTATGCCGGACCTTTAA
CATGATTGACCGCGATCGCGACGGCTACGTCACCGTCCAGGATGTTCGTG
CCATTATGGTCGTCCTGGGCGAAGTCGTAACCGATGACGATATTAAGGAT
ATCTGCCAAGCAGTCGATATGGATGGCGATGGTCGCATAAGCTTGCGCGA
TTTCGTAGGCTTTATGCACAGCCCCATTGCAAGCTTTCTAGACCAT

BO34716.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:10:41
Subject Length Description Subject Range Query Range Score Percent Strand
CG13526-RA 465 CG13526-PA 1..462 17..478 2280 99.6 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:10:43
Subject Length Description Subject Range Query Range Score Percent Strand
CG13526-RA 678 CG13526-RA 106..568 16..478 2285 99.6 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:10:40
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 22755324..22755786 16..478 2285 99.6 Plus
Blast to na_te.dros performed on 2014-11-28 14:10:41 has no hits.

BO34716.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-10-29 16:44:50 Download gff for BO34716.complete
Subject Subject Range Query Range Percent Splice Strand
CG13526-RA 107..568 17..480 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:42:40 Download gff for BO34716.complete
Subject Subject Range Query Range Percent Splice Strand
CG13526-RA 107..568 17..480 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:42:40 Download gff for BO34716.complete
Subject Subject Range Query Range Percent Splice Strand
2R 22755325..22755786 17..480 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-10-29 16:44:50 Download gff for BO34716.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 18642830..18643291 17..480 99   Plus

BO34716.pep Sequence

Translation from 16 to 496

> BO34716.pep
MPSFSGNELTNEHIDELRDAFEKYDLDSNGTLSANEVRLALISVGYEITE
AELYDLIHSVAVRDEERLDLKKFIRMMAPRMANVDSDKSLCRTFNMIDRD
RDGYVTVQDVRAIMVVLGEVVTDDDIKDICQAVDMDGDGRISLRDFVGFM
HSPIASFLDH

BO34716.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:42:14
Subject Length Description Subject Range Query Range Score Percent Strand
CG13526-PA 154 CG13526-PA 1..154 1..154 785 100 Plus
Cam-PD 149 CG8472-PD 3..148 7..152 278 34.2 Plus
Cam-PC 149 CG8472-PC 3..148 7..152 278 34.2 Plus
Cam-PE 149 CG8472-PE 3..148 7..152 278 34.2 Plus
Cam-PB 149 CG8472-PB 3..148 7..152 278 34.2 Plus