BO34718.complete Sequence
820 bp assembled on 2013-10-29
GenBank Submission: KX798663
> BO34718.complete
GAAGTTATCAGTCGACATGTTTGCAATTTCGAGAAGCCTCCGATTGAGCC
GTTGCCTTTCGCCCTTCGGACGCGGTCTGAGCGCATCCAGTTCGCCTGGA
CCGCGCACCCTAGTCGCCATCGACTTCGACAGGACCATCGTTGAGCAGGA
CTCCTATTTGGCGGTGAGCCAACTACTGCCGACCAGTCAGCGCAAGGAGC
TGCAGGACCAGATCCCCAAGTGCGGCTGGCTGAGCTTCATAAGCCAAGTG
TTGCAGCGCCTGCATGGCGAGCACAAGGTGAACTCCGCGTCGGTGGGCAA
GCGTGTGCGCAGTCTCACAGCCGTGCCTGGAATGCTGCGGGTGATGCGCC
AATTAGCCCGGATCCCTGAGCTCGAACTGTGCATCGTCAGCGACGCCAAC
TCCTTCTTCATCGGCGAGTGGCTGCAGGCGTACGCCATTGAGTGCCTCTT
TGCCGGCGGCGTGTTCACCAATCCCGCATGCGTCCAAGCGAGCGGCGAAC
TGCTGGTGCTGCCCTACCAAGAGCAGACTGACTGCGATCTCTGCCCCTCC
AACATGTGCAAGGGCTCCGTGATGGACGAGCTGACGTGCAGCGGGCGATA
CGAGCGCTTGATCTATGTGGGCGATAGTTGCAACGATCTGTGCGCCATTA
AGCGGCTGCGGCAAAAGGATGTCGCCTGCATCCGGCGCGGATTCGAGCTG
CACGGTAAGATGACCGCCCATGGCCAGGAACTGGCCTGCTCCGTGCTCAC
ATGGCGCGACGGCCACGAGCTGGAGGAGCTCCTGATGCCCAAAATCGTGG
CGGCAAGCTTTCTAGACCAT
BO34718.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:10:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14212-RA | 789 | CG14212-PA | 1..786 | 17..802 | 3900 | 99.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:10:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14212-RA | 897 | CG14212-RA | 34..819 | 17..802 | 3900 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:10:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 19625738..19626523 | 17..802 | 3900 | 99.7 | Plus |
Blast to na_te.dros performed on 2014-11-28 14:10:50 has no hits.
BO34718.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-10-29 16:44:54 Download gff for
BO34718.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14212-RA | 40..819 | 23..804 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:42:43 Download gff for
BO34718.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14212-RA | 40..819 | 23..804 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:42:43 Download gff for
BO34718.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 19625744..19626523 | 23..804 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-10-29 16:44:54 Download gff for
BO34718.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 19519777..19520556 | 23..804 | 99 | | Plus |
BO34718.pep Sequence
Translation from 16 to 820
> BO34718.pep
MFAISRSLRLSRCLSPFGRGLSASSSPGPRTLVAIDFDRTIVEQDSYLAV
SQLLPTSQRKELQDQIPKCGWLSFISQVLQRLHGEHKVNSASVGKRVRSL
TAVPGMLRVMRQLARIPELELCIVSDANSFFIGEWLQAYAIECLFAGGVF
TNPACVQASGELLVLPYQEQTDCDLCPSNMCKGSVMDELTCSGRYERLIY
VGDSCNDLCAIKRLRQKDVACIRRGFELHGKMTAHGQELACSVLTWRDGH
ELEELLMPKIVAASFLDH
BO34718.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:42:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14212-PA | 262 | CG14212-PA | 1..262 | 1..262 | 1365 | 100 | Plus |
CG12237-PA | 306 | CG12237-PA | 27..261 | 30..257 | 394 | 37.1 | Plus |