Clone BO34718 Report

Search the DGRC for BO34718

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:347
Well:18
Vector:pDNR-Dual
Associated Gene/TranscriptCG14212-RA
Protein status:BO34718.pep: Imported from assembly
Sequenced Size:820

Clone Sequence Records

BO34718.complete Sequence

820 bp assembled on 2013-10-29

GenBank Submission: KX798663

> BO34718.complete
GAAGTTATCAGTCGACATGTTTGCAATTTCGAGAAGCCTCCGATTGAGCC
GTTGCCTTTCGCCCTTCGGACGCGGTCTGAGCGCATCCAGTTCGCCTGGA
CCGCGCACCCTAGTCGCCATCGACTTCGACAGGACCATCGTTGAGCAGGA
CTCCTATTTGGCGGTGAGCCAACTACTGCCGACCAGTCAGCGCAAGGAGC
TGCAGGACCAGATCCCCAAGTGCGGCTGGCTGAGCTTCATAAGCCAAGTG
TTGCAGCGCCTGCATGGCGAGCACAAGGTGAACTCCGCGTCGGTGGGCAA
GCGTGTGCGCAGTCTCACAGCCGTGCCTGGAATGCTGCGGGTGATGCGCC
AATTAGCCCGGATCCCTGAGCTCGAACTGTGCATCGTCAGCGACGCCAAC
TCCTTCTTCATCGGCGAGTGGCTGCAGGCGTACGCCATTGAGTGCCTCTT
TGCCGGCGGCGTGTTCACCAATCCCGCATGCGTCCAAGCGAGCGGCGAAC
TGCTGGTGCTGCCCTACCAAGAGCAGACTGACTGCGATCTCTGCCCCTCC
AACATGTGCAAGGGCTCCGTGATGGACGAGCTGACGTGCAGCGGGCGATA
CGAGCGCTTGATCTATGTGGGCGATAGTTGCAACGATCTGTGCGCCATTA
AGCGGCTGCGGCAAAAGGATGTCGCCTGCATCCGGCGCGGATTCGAGCTG
CACGGTAAGATGACCGCCCATGGCCAGGAACTGGCCTGCTCCGTGCTCAC
ATGGCGCGACGGCCACGAGCTGGAGGAGCTCCTGATGCCCAAAATCGTGG
CGGCAAGCTTTCTAGACCAT

BO34718.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:10:52
Subject Length Description Subject Range Query Range Score Percent Strand
CG14212-RA 789 CG14212-PA 1..786 17..802 3900 99.7 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:10:52
Subject Length Description Subject Range Query Range Score Percent Strand
CG14212-RA 897 CG14212-RA 34..819 17..802 3900 99.7 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:10:50
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 19625738..19626523 17..802 3900 99.7 Plus
Blast to na_te.dros performed on 2014-11-28 14:10:50 has no hits.

BO34718.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-10-29 16:44:54 Download gff for BO34718.complete
Subject Subject Range Query Range Percent Splice Strand
CG14212-RA 40..819 23..804 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:42:43 Download gff for BO34718.complete
Subject Subject Range Query Range Percent Splice Strand
CG14212-RA 40..819 23..804 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:42:43 Download gff for BO34718.complete
Subject Subject Range Query Range Percent Splice Strand
X 19625744..19626523 23..804 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-10-29 16:44:54 Download gff for BO34718.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 19519777..19520556 23..804 99   Plus

BO34718.pep Sequence

Translation from 16 to 820

> BO34718.pep
MFAISRSLRLSRCLSPFGRGLSASSSPGPRTLVAIDFDRTIVEQDSYLAV
SQLLPTSQRKELQDQIPKCGWLSFISQVLQRLHGEHKVNSASVGKRVRSL
TAVPGMLRVMRQLARIPELELCIVSDANSFFIGEWLQAYAIECLFAGGVF
TNPACVQASGELLVLPYQEQTDCDLCPSNMCKGSVMDELTCSGRYERLIY
VGDSCNDLCAIKRLRQKDVACIRRGFELHGKMTAHGQELACSVLTWRDGH
ELEELLMPKIVAASFLDH

BO34718.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:42:19
Subject Length Description Subject Range Query Range Score Percent Strand
CG14212-PA 262 CG14212-PA 1..262 1..262 1365 100 Plus
CG12237-PA 306 CG12237-PA 27..261 30..257 394 37.1 Plus