BO34719.complete Sequence
766 bp assembled on 2013-10-29
GenBank Submission: KX795687
> BO34719.complete
GAAGTTATCAGTCGACATGAAAGGAAACAGACAGAAGACCTTCGTCGTGG
AGGATTCCGAATCGCAGAAGCCCGAAAAGAATCCGAGTCCTGAGCGCAAG
GAGGATCGCAAGGAGCGCAGGAGGGAGGAGGAAATGGAACGCAAGCGGGA
ACTGGAGCGGCGAAAGGAACTCGCGAGGGAAAAGGAACGAGAGAAAAAGC
AGCATCAGCAGGAGTGGCGCAAGGAACTGGAGAAGGAACGTCAGCGTGAA
AAGGAATTGCAGCGTGAACATCTGAGGAAGGAGCCATCCACTTCCTCCAA
AAGGGTAAATCCAGAAATCACTAAATTCGACGAGGAATTCGAGCAGGATA
TTCAGAAGTTGGAGCAAAGTATTTGCCAACTGGACTTTCGCTCCAAAACG
ATGGCCACCATGTGGATGGACAAGCTGCGCCAACCACCACAAAATGCAGA
CGAGGCCAGATCTAGGAACATAATAACATCCCATCTGCTCAAGTGCTGTG
GCGATAACATATTCAATAAGGAGCCATTCAATCATCCTCCGCCACCACAA
AATTTGACAACCATAAGGGAGATGATGTTCTTAACGCGCGATAGTACGTG
CCACGGAATGCCCATTTCCAAGCAGATGGAACCCAACGCCAATCTAACCC
AATTATTTAGCGATTCATACGATGGTGGCGAGTTCCTGAGAAAGCTACCA
GTGCCACGTGATGGGGCATTCTTTATCTATTACATGCAACCAAATTTGGC
AAGCTTTCTAGACCAT
BO34719.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:10:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14154-RB | 735 | CG14154-PB | 1..732 | 17..748 | 3585 | 99.3 | Plus |
CG14154-RA | 750 | CG14154-PA | 23..747 | 24..748 | 3550 | 99.3 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:10:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14154-RB | 952 | CG14154-RB | 83..817 | 14..748 | 3600 | 99.3 | Plus |
CG14154-RA | 1019 | CG14154-RA | 160..884 | 24..748 | 3550 | 99.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:10:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 10642048..10642601 | 24..577 | 2710 | 99.3 | Plus |
3L | 28110227 | 3L | 10642703..10642874 | 577..748 | 845 | 99.4 | Plus |
Blast to na_te.dros performed 2014-11-28 14:10:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2301..2426 | 131..256 | 117 | 54.8 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6799..6944 | 124..269 | 109 | 52.7 | Plus |
BO34719.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-10-29 16:44:54 Download gff for
BO34719.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14154-RB | 86..817 | 17..750 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:42:45 Download gff for
BO34719.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14154-RB | 86..817 | 17..750 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:42:45 Download gff for
BO34719.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 10642048..10642601 | 24..577 | 99 | -> | Plus |
3L | 10642704..10642874 | 578..750 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-10-29 16:44:54 Download gff for
BO34719.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 10635148..10635701 | 24..577 | 99 | -> | Plus |
arm_3L | 10635804..10635974 | 578..750 | 98 | | Plus |
BO34719.pep Sequence
Translation from 16 to 766
> BO34719.pep
MKGNRQKTFVVEDSESQKPEKNPSPERKEDRKERRREEEMERKRELERRK
ELAREKEREKKQHQQEWRKELEKERQREKELQREHLRKEPSTSSKRVNPE
ITKFDEEFEQDIQKLEQSICQLDFRSKTMATMWMDKLRQPPQNADEARSR
NIITSHLLKCCGDNIFNKEPFNHPPPPQNLTTIREMMFLTRDSTCHGMPI
SKQMEPNANLTQLFSDSYDGGEFLRKLPVPRDGAFFIYYMQPNLASFLDH
BO34719.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:42:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14154-PB | 244 | CG14154-PB | 1..244 | 1..244 | 1294 | 100 | Plus |
CG14154-PA | 249 | CG14154-PA | 9..249 | 4..244 | 1278 | 100 | Plus |
CG2839-PA | 826 | CG2839-PA | 277..425 | 4..150 | 163 | 33.3 | Plus |
CG2839-PA | 826 | CG2839-PA | 624..753 | 12..131 | 159 | 33.8 | Plus |
CG2839-PA | 826 | CG2839-PA | 342..476 | 5..150 | 158 | 30.1 | Plus |
CG2839-PA | 826 | CG2839-PA | 467..617 | 2..150 | 150 | 27.6 | Plus |
CG2839-PA | 826 | CG2839-PA | 594..736 | 13..150 | 149 | 28.3 | Plus |