Clone BO34719 Report

Search the DGRC for BO34719

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:347
Well:19
Vector:pDNR-Dual
Associated Gene/TranscriptCG14154-RB
Protein status:BO34719.pep: Imported from assembly
Sequenced Size:766

Clone Sequence Records

BO34719.complete Sequence

766 bp assembled on 2013-10-29

GenBank Submission: KX795687

> BO34719.complete
GAAGTTATCAGTCGACATGAAAGGAAACAGACAGAAGACCTTCGTCGTGG
AGGATTCCGAATCGCAGAAGCCCGAAAAGAATCCGAGTCCTGAGCGCAAG
GAGGATCGCAAGGAGCGCAGGAGGGAGGAGGAAATGGAACGCAAGCGGGA
ACTGGAGCGGCGAAAGGAACTCGCGAGGGAAAAGGAACGAGAGAAAAAGC
AGCATCAGCAGGAGTGGCGCAAGGAACTGGAGAAGGAACGTCAGCGTGAA
AAGGAATTGCAGCGTGAACATCTGAGGAAGGAGCCATCCACTTCCTCCAA
AAGGGTAAATCCAGAAATCACTAAATTCGACGAGGAATTCGAGCAGGATA
TTCAGAAGTTGGAGCAAAGTATTTGCCAACTGGACTTTCGCTCCAAAACG
ATGGCCACCATGTGGATGGACAAGCTGCGCCAACCACCACAAAATGCAGA
CGAGGCCAGATCTAGGAACATAATAACATCCCATCTGCTCAAGTGCTGTG
GCGATAACATATTCAATAAGGAGCCATTCAATCATCCTCCGCCACCACAA
AATTTGACAACCATAAGGGAGATGATGTTCTTAACGCGCGATAGTACGTG
CCACGGAATGCCCATTTCCAAGCAGATGGAACCCAACGCCAATCTAACCC
AATTATTTAGCGATTCATACGATGGTGGCGAGTTCCTGAGAAAGCTACCA
GTGCCACGTGATGGGGCATTCTTTATCTATTACATGCAACCAAATTTGGC
AAGCTTTCTAGACCAT

BO34719.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:10:55
Subject Length Description Subject Range Query Range Score Percent Strand
CG14154-RB 735 CG14154-PB 1..732 17..748 3585 99.3 Plus
CG14154-RA 750 CG14154-PA 23..747 24..748 3550 99.3 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:10:57
Subject Length Description Subject Range Query Range Score Percent Strand
CG14154-RB 952 CG14154-RB 83..817 14..748 3600 99.3 Plus
CG14154-RA 1019 CG14154-RA 160..884 24..748 3550 99.3 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:10:53
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 10642048..10642601 24..577 2710 99.3 Plus
3L 28110227 3L 10642703..10642874 577..748 845 99.4 Plus
Blast to na_te.dros performed 2014-11-28 14:10:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2301..2426 131..256 117 54.8 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6799..6944 124..269 109 52.7 Plus

BO34719.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-10-29 16:44:54 Download gff for BO34719.complete
Subject Subject Range Query Range Percent Splice Strand
CG14154-RB 86..817 17..750 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:42:45 Download gff for BO34719.complete
Subject Subject Range Query Range Percent Splice Strand
CG14154-RB 86..817 17..750 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:42:45 Download gff for BO34719.complete
Subject Subject Range Query Range Percent Splice Strand
3L 10642048..10642601 24..577 99 -> Plus
3L 10642704..10642874 578..750 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-10-29 16:44:54 Download gff for BO34719.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 10635148..10635701 24..577 99 -> Plus
arm_3L 10635804..10635974 578..750 98   Plus

BO34719.pep Sequence

Translation from 16 to 766

> BO34719.pep
MKGNRQKTFVVEDSESQKPEKNPSPERKEDRKERRREEEMERKRELERRK
ELAREKEREKKQHQQEWRKELEKERQREKELQREHLRKEPSTSSKRVNPE
ITKFDEEFEQDIQKLEQSICQLDFRSKTMATMWMDKLRQPPQNADEARSR
NIITSHLLKCCGDNIFNKEPFNHPPPPQNLTTIREMMFLTRDSTCHGMPI
SKQMEPNANLTQLFSDSYDGGEFLRKLPVPRDGAFFIYYMQPNLASFLDH

BO34719.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:42:22
Subject Length Description Subject Range Query Range Score Percent Strand
CG14154-PB 244 CG14154-PB 1..244 1..244 1294 100 Plus
CG14154-PA 249 CG14154-PA 9..249 4..244 1278 100 Plus
CG2839-PA 826 CG2839-PA 277..425 4..150 163 33.3 Plus
CG2839-PA 826 CG2839-PA 624..753 12..131 159 33.8 Plus
CG2839-PA 826 CG2839-PA 342..476 5..150 158 30.1 Plus
CG2839-PA 826 CG2839-PA 467..617 2..150 150 27.6 Plus
CG2839-PA 826 CG2839-PA 594..736 13..150 149 28.3 Plus