BO34721.complete Sequence
1348 bp assembled on 2013-10-29
GenBank Submission: KX797958
> BO34721.complete
GAAGTTATCAGTCGACATGAAACGTCATTATTACAATACTGGGGATGACC
AGCAGGAGGTGGAGAGCTCTCCAAGTCCGCCGCCTCCTCCGCCTTTCCAA
TCGCCATTATCATCGCCCGAGTCTTTGCAGACCCCGGATGGATATCCCAT
TTTGTACGTGGATGTGGTAAAGAATAAGCCCAAACAGGAGTTGCCGCCGT
CCGCATCACCGTCCCAACCACTTGCGCCGGAGTTCAGCATCTTTCGCGAA
GATTTTCCGGCTCTGCCAGGATCATTACCATCTGCATTACCAACCGCATT
ACCAACGACATCGAGCCCTGTGGTGCCCGACGACTGGACAGCCATGATGA
GCAACAGCGAGCAGGTCGAACTCGCCAAATTTCGAAATACAGTTATCCGT
AATTCCAGTGATCCGTGCGTTAACGCTAACGGCAACGAGGTGCTCCGTCA
GCCAACCCATGCTCCCGAGAAGCGCCAGAATATGGAGTTGCTGCCCCATA
TGTACGGTTATCTCGGCAATCCGTTCCGTTTAAATTTGAGCATGATATTT
ACCAAGCAATTCCTGCTCGAAGGCGTCAGGCAGAGGGCCATAAATGCGGC
CCACAAGAGGGCTGCCCTGGCAAAACCAGCAATCCAACCACCACCCGGAT
TCGAGAATTGCAAAATTTTTGCCCGCTTGATAACCAACAGTGATGGTATG
CCACTGGGTGGAGTCACATTTGAGCTGGGCTCACCCACTAATGAAACGAC
TTCGAATGTGGAGGCGAAACCTTCGGGTTCCACCATTCAGGGAGCCTTTG
GGATGTTGGGACTGGCCAAGAAACTGCGATCGATTAATCAGAACCCGCTT
CTATTCGGAAATAATGTTGCCCACAATATAGGCGGAGCCGCGGACTCGAT
CTTTACCGGGCCAATTCAAGAAGCCCGTTTGACTCCTCAGGAGATGAGCT
ACAAATTGCCATTGAACTATCTCTTCAATGTAAATATGAGCCTACAGGAG
CCCAAAATCGAGGAAATGCATGATGAGCTCCTATTTTTCTTCTTCTACAC
ATATGCTGGCGACATGATGCAGATGCTCGCGGCTGCTGAACTGGCGGAAC
GTGGATGGCGCTATCACAAGTATGAACATTTCTGGGTCATTCGCCAGGCG
GACAATCCCAACTACTTATATCACGGATTCCGGGAGTTCGGAGAGTACAA
TTACTTCAACATGTGGCAGTGGAAGATCCTGCCACGACACTTTTACCTGG
ATCCCGAGATCCTGGAGCGCACTCTATCCAAGGAAGAGCTGTATGTGACG
TACGGATACCATCCCCAGATGTCGGGTATTGCAAGCTTTCTAGACCAT
BO34721.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:11:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15262-RA | 1317 | CG15262-PA | 1..1314 | 17..1330 | 6555 | 99.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:11:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15262-RA | 1560 | CG15262-RA | 140..1453 | 17..1330 | 6555 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:11:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 15297947..15299260 | 17..1330 | 6555 | 99.9 | Plus |
Blast to na_te.dros performed on 2014-11-28 14:11:04 has no hits.
BO34721.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-10-29 16:44:58 Download gff for
BO34721.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15262-RA | 140..1453 | 17..1332 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:42:49 Download gff for
BO34721.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15262-RA | 140..1453 | 17..1332 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:42:49 Download gff for
BO34721.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 15297947..15299260 | 17..1332 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-10-29 16:44:58 Download gff for
BO34721.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 15297947..15299260 | 17..1332 | 99 | | Plus |
BO34721.pep Sequence
Translation from 16 to 1348
> BO34721.pep
MKRHYYNTGDDQQEVESSPSPPPPPPFQSPLSSPESLQTPDGYPILYVDV
VKNKPKQELPPSASPSQPLAPEFSIFREDFPALPGSLPSALPTALPTTSS
PVVPDDWTAMMSNSEQVELAKFRNTVIRNSSDPCVNANGNEVLRQPTHAP
EKRQNMELLPHMYGYLGNPFRLNLSMIFTKQFLLEGVRQRAINAAHKRAA
LAKPAIQPPPGFENCKIFARLITNSDGMPLGGVTFELGSPTNETTSNVEA
KPSGSTIQGAFGMLGLAKKLRSINQNPLLFGNNVAHNIGGAADSIFTGPI
QEARLTPQEMSYKLPLNYLFNVNMSLQEPKIEEMHDELLFFFFYTYAGDM
MQMLAAAELAERGWRYHKYEHFWVIRQADNPNYLYHGFREFGEYNYFNMW
QWKILPRHFYLDPEILERTLSKEELYVTYGYHPQMSGIASFLDH
BO34721.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:42:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15262-PA | 438 | CG15262-PA | 1..438 | 1..438 | 2345 | 100 | Plus |
Rga-PC | 579 | CG2161-PC | 352..566 | 223..418 | 276 | 31.2 | Plus |
Rga-PB | 579 | CG2161-PB | 352..566 | 223..418 | 276 | 31.2 | Plus |
Rga-PA | 585 | CG2161-PA | 358..572 | 223..418 | 276 | 31.2 | Plus |