Clone BO34721 Report

Search the DGRC for BO34721

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:347
Well:21
Vector:pDNR-Dual
Associated Gene/TranscriptCG15262-RA
Protein status:BO34721.pep: Imported from assembly
Sequenced Size:1348

Clone Sequence Records

BO34721.complete Sequence

1348 bp assembled on 2013-10-29

GenBank Submission: KX797958

> BO34721.complete
GAAGTTATCAGTCGACATGAAACGTCATTATTACAATACTGGGGATGACC
AGCAGGAGGTGGAGAGCTCTCCAAGTCCGCCGCCTCCTCCGCCTTTCCAA
TCGCCATTATCATCGCCCGAGTCTTTGCAGACCCCGGATGGATATCCCAT
TTTGTACGTGGATGTGGTAAAGAATAAGCCCAAACAGGAGTTGCCGCCGT
CCGCATCACCGTCCCAACCACTTGCGCCGGAGTTCAGCATCTTTCGCGAA
GATTTTCCGGCTCTGCCAGGATCATTACCATCTGCATTACCAACCGCATT
ACCAACGACATCGAGCCCTGTGGTGCCCGACGACTGGACAGCCATGATGA
GCAACAGCGAGCAGGTCGAACTCGCCAAATTTCGAAATACAGTTATCCGT
AATTCCAGTGATCCGTGCGTTAACGCTAACGGCAACGAGGTGCTCCGTCA
GCCAACCCATGCTCCCGAGAAGCGCCAGAATATGGAGTTGCTGCCCCATA
TGTACGGTTATCTCGGCAATCCGTTCCGTTTAAATTTGAGCATGATATTT
ACCAAGCAATTCCTGCTCGAAGGCGTCAGGCAGAGGGCCATAAATGCGGC
CCACAAGAGGGCTGCCCTGGCAAAACCAGCAATCCAACCACCACCCGGAT
TCGAGAATTGCAAAATTTTTGCCCGCTTGATAACCAACAGTGATGGTATG
CCACTGGGTGGAGTCACATTTGAGCTGGGCTCACCCACTAATGAAACGAC
TTCGAATGTGGAGGCGAAACCTTCGGGTTCCACCATTCAGGGAGCCTTTG
GGATGTTGGGACTGGCCAAGAAACTGCGATCGATTAATCAGAACCCGCTT
CTATTCGGAAATAATGTTGCCCACAATATAGGCGGAGCCGCGGACTCGAT
CTTTACCGGGCCAATTCAAGAAGCCCGTTTGACTCCTCAGGAGATGAGCT
ACAAATTGCCATTGAACTATCTCTTCAATGTAAATATGAGCCTACAGGAG
CCCAAAATCGAGGAAATGCATGATGAGCTCCTATTTTTCTTCTTCTACAC
ATATGCTGGCGACATGATGCAGATGCTCGCGGCTGCTGAACTGGCGGAAC
GTGGATGGCGCTATCACAAGTATGAACATTTCTGGGTCATTCGCCAGGCG
GACAATCCCAACTACTTATATCACGGATTCCGGGAGTTCGGAGAGTACAA
TTACTTCAACATGTGGCAGTGGAAGATCCTGCCACGACACTTTTACCTGG
ATCCCGAGATCCTGGAGCGCACTCTATCCAAGGAAGAGCTGTATGTGACG
TACGGATACCATCCCCAGATGTCGGGTATTGCAAGCTTTCTAGACCAT

BO34721.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:11:05
Subject Length Description Subject Range Query Range Score Percent Strand
CG15262-RA 1317 CG15262-PA 1..1314 17..1330 6555 99.9 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:11:07
Subject Length Description Subject Range Query Range Score Percent Strand
CG15262-RA 1560 CG15262-RA 140..1453 17..1330 6555 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:11:03
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 15297947..15299260 17..1330 6555 99.9 Plus
Blast to na_te.dros performed on 2014-11-28 14:11:04 has no hits.

BO34721.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-10-29 16:44:58 Download gff for BO34721.complete
Subject Subject Range Query Range Percent Splice Strand
CG15262-RA 140..1453 17..1332 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:42:49 Download gff for BO34721.complete
Subject Subject Range Query Range Percent Splice Strand
CG15262-RA 140..1453 17..1332 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:42:49 Download gff for BO34721.complete
Subject Subject Range Query Range Percent Splice Strand
2L 15297947..15299260 17..1332 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-10-29 16:44:58 Download gff for BO34721.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 15297947..15299260 17..1332 99   Plus

BO34721.pep Sequence

Translation from 16 to 1348

> BO34721.pep
MKRHYYNTGDDQQEVESSPSPPPPPPFQSPLSSPESLQTPDGYPILYVDV
VKNKPKQELPPSASPSQPLAPEFSIFREDFPALPGSLPSALPTALPTTSS
PVVPDDWTAMMSNSEQVELAKFRNTVIRNSSDPCVNANGNEVLRQPTHAP
EKRQNMELLPHMYGYLGNPFRLNLSMIFTKQFLLEGVRQRAINAAHKRAA
LAKPAIQPPPGFENCKIFARLITNSDGMPLGGVTFELGSPTNETTSNVEA
KPSGSTIQGAFGMLGLAKKLRSINQNPLLFGNNVAHNIGGAADSIFTGPI
QEARLTPQEMSYKLPLNYLFNVNMSLQEPKIEEMHDELLFFFFYTYAGDM
MQMLAAAELAERGWRYHKYEHFWVIRQADNPNYLYHGFREFGEYNYFNMW
QWKILPRHFYLDPEILERTLSKEELYVTYGYHPQMSGIASFLDH

BO34721.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:42:27
Subject Length Description Subject Range Query Range Score Percent Strand
CG15262-PA 438 CG15262-PA 1..438 1..438 2345 100 Plus
Rga-PC 579 CG2161-PC 352..566 223..418 276 31.2 Plus
Rga-PB 579 CG2161-PB 352..566 223..418 276 31.2 Plus
Rga-PA 585 CG2161-PA 358..572 223..418 276 31.2 Plus