BO34725.complete Sequence
889 bp assembled on 2013-10-29
GenBank Submission: KX797331
> BO34725.complete
GAAGTTATCAGTCGACATGCCATACCACGATCGAGCCAAAGCCCGATTGG
AGAACGAGGTGGTTCTGCTGCGGAGCGAGGTGTCCTCGCTGCGATCCAAG
CACAACCAACATCGTAAGTATCGGCAGGAGCAGGTGGTTCTGCAGGCGCG
TATGGAACAGGAGATCCAGCTTCTACAGAGCGAACTAGCCGCAGCTCAAT
CGAATCGGAATGAGCGGGAGTGCGGTGGAGCCGAGCAGTGTTCAGTGTTG
AGCCAGCAGCTGGAGAAACTTGACGAGCACGTGGCTAAGCAGGAGAAGTA
CATTGCCTTCCTGGAGGAGCAGATCAATCTCACACGTAACAAGTACCAGC
AACGTATGACCGAAGTCCGGCAGAATGCCGAACTGGTGGAAAAGGAGATG
AAGCGGGTGCGCCGCGAGATGAAGACCATTGCCGAGCAGGCTGGGGAAGT
GGACAGCCTCAAGAACCAAGTCGGTTTCCTCACCGCCAAGCTGGAGCGCC
GGAACGCCATCATCTCCAGGTACGAAGCCCAGCAGGAGGAAATGATAAGT
ATCATGGCAAGTCTCCAGAAGAAGAAAGTTAAAAAAACGCGCCATCAGAA
GATTCACAACAACCATGACGATAAAGCTGATGTCAGATCGATCCCTTCCG
AACAGCTACCAATGCCCAAGCCGAGTGATCAAATAAAGCATCGCAAGAAA
CGGAAATTTGGCGAAGGCGATAAGGAAGATTCCAGCTCGGCGGGCTCTGA
TAAGCCACCAAGTTTTGAGGCGAATCCCAGGTCTTCAAAAATCCGATCCC
ATAACTTGGACTGCCTCTCCTCTGCGCTGAAAAATAAGTTAAGTAACCAG
CAACAGTCAACTGTCGAGGGAGCAAGCTTTCTAGACCAT
BO34725.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:11:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13733-RA | 858 | CG13733-PA | 1..855 | 17..871 | 4230 | 99.6 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:11:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13733-RA | 1132 | CG13733-RA | 121..975 | 17..871 | 4230 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:11:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 17477952..17478806 | 871..17 | 4230 | 99.6 | Minus |
Blast to na_te.dros performed on 2014-11-28 14:11:09 has no hits.
BO34725.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-10-29 16:44:59 Download gff for
BO34725.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13733-RA | 121..975 | 17..873 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:42:51 Download gff for
BO34725.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13733-RA | 121..975 | 17..873 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:42:51 Download gff for
BO34725.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 17477949..17478806 | 17..873 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-10-29 16:44:59 Download gff for
BO34725.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 17471049..17471906 | 17..873 | 99 | | Minus |
BO34725.pep Sequence
Translation from 16 to 889
> BO34725.pep
MPYHDRAKARLENEVVLLRSEVSSLRSKHNQHRKYRQEQVVLQARMEQEI
QLLQSELAAAQSNRNERECGGAEQCSVLSQQLEKLDEHVAKQEKYIAFLE
EQINLTRNKYQQRMTEVRQNAELVEKEMKRVRREMKTIAEQAGEVDSLKN
QVGFLTAKLERRNAIISRYEAQQEEMISIMASLQKKKVKKTRHQKIHNNH
DDKADVRSIPSEQLPMPKPSDQIKHRKKRKFGEGDKEDSSSAGSDKPPSF
EANPRSSKIRSHNLDCLSSALKNKLSNQQQSTVEGASFLDH
BO34725.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:42:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13733-PA | 285 | CG13733-PA | 1..285 | 1..285 | 1431 | 100 | Plus |