Clone BO34725 Report

Search the DGRC for BO34725

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:347
Well:25
Vector:pDNR-Dual
Associated Gene/TranscriptCG13733-RA
Protein status:BO34725.pep: Imported from assembly
Sequenced Size:889

Clone Sequence Records

BO34725.complete Sequence

889 bp assembled on 2013-10-29

GenBank Submission: KX797331

> BO34725.complete
GAAGTTATCAGTCGACATGCCATACCACGATCGAGCCAAAGCCCGATTGG
AGAACGAGGTGGTTCTGCTGCGGAGCGAGGTGTCCTCGCTGCGATCCAAG
CACAACCAACATCGTAAGTATCGGCAGGAGCAGGTGGTTCTGCAGGCGCG
TATGGAACAGGAGATCCAGCTTCTACAGAGCGAACTAGCCGCAGCTCAAT
CGAATCGGAATGAGCGGGAGTGCGGTGGAGCCGAGCAGTGTTCAGTGTTG
AGCCAGCAGCTGGAGAAACTTGACGAGCACGTGGCTAAGCAGGAGAAGTA
CATTGCCTTCCTGGAGGAGCAGATCAATCTCACACGTAACAAGTACCAGC
AACGTATGACCGAAGTCCGGCAGAATGCCGAACTGGTGGAAAAGGAGATG
AAGCGGGTGCGCCGCGAGATGAAGACCATTGCCGAGCAGGCTGGGGAAGT
GGACAGCCTCAAGAACCAAGTCGGTTTCCTCACCGCCAAGCTGGAGCGCC
GGAACGCCATCATCTCCAGGTACGAAGCCCAGCAGGAGGAAATGATAAGT
ATCATGGCAAGTCTCCAGAAGAAGAAAGTTAAAAAAACGCGCCATCAGAA
GATTCACAACAACCATGACGATAAAGCTGATGTCAGATCGATCCCTTCCG
AACAGCTACCAATGCCCAAGCCGAGTGATCAAATAAAGCATCGCAAGAAA
CGGAAATTTGGCGAAGGCGATAAGGAAGATTCCAGCTCGGCGGGCTCTGA
TAAGCCACCAAGTTTTGAGGCGAATCCCAGGTCTTCAAAAATCCGATCCC
ATAACTTGGACTGCCTCTCCTCTGCGCTGAAAAATAAGTTAAGTAACCAG
CAACAGTCAACTGTCGAGGGAGCAAGCTTTCTAGACCAT

BO34725.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:11:10
Subject Length Description Subject Range Query Range Score Percent Strand
CG13733-RA 858 CG13733-PA 1..855 17..871 4230 99.6 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:11:11
Subject Length Description Subject Range Query Range Score Percent Strand
CG13733-RA 1132 CG13733-RA 121..975 17..871 4230 99.6 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:11:08
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 17477952..17478806 871..17 4230 99.6 Minus
Blast to na_te.dros performed on 2014-11-28 14:11:09 has no hits.

BO34725.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-10-29 16:44:59 Download gff for BO34725.complete
Subject Subject Range Query Range Percent Splice Strand
CG13733-RA 121..975 17..873 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:42:51 Download gff for BO34725.complete
Subject Subject Range Query Range Percent Splice Strand
CG13733-RA 121..975 17..873 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:42:51 Download gff for BO34725.complete
Subject Subject Range Query Range Percent Splice Strand
3L 17477949..17478806 17..873 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-10-29 16:44:59 Download gff for BO34725.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 17471049..17471906 17..873 99   Minus

BO34725.pep Sequence

Translation from 16 to 889

> BO34725.pep
MPYHDRAKARLENEVVLLRSEVSSLRSKHNQHRKYRQEQVVLQARMEQEI
QLLQSELAAAQSNRNERECGGAEQCSVLSQQLEKLDEHVAKQEKYIAFLE
EQINLTRNKYQQRMTEVRQNAELVEKEMKRVRREMKTIAEQAGEVDSLKN
QVGFLTAKLERRNAIISRYEAQQEEMISIMASLQKKKVKKTRHQKIHNNH
DDKADVRSIPSEQLPMPKPSDQIKHRKKRKFGEGDKEDSSSAGSDKPPSF
EANPRSSKIRSHNLDCLSSALKNKLSNQQQSTVEGASFLDH

BO34725.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:42:29
Subject Length Description Subject Range Query Range Score Percent Strand
CG13733-PA 285 CG13733-PA 1..285 1..285 1431 100 Plus