BO34729.complete Sequence
445 bp assembled on 2013-10-29
GenBank Submission: KX794271
> BO34729.complete
GAAGTTATCAGTCGACATGAAATTCCTCGCCGTCTGCTTCTTCGCTGTTG
TGGCTGTGGCTGCTGCCAAACCCGGTATTGTGGCTCCTCTGGCCTACACC
GCTCCGGCTGTGGTGGGCAGTGCCGCCTACGTGGCTCCCTACGCCTCCAG
CTACACCGCCAACTCGGTGGCCCACAGCGCCGCCTTCCCAGCTGCCTACA
CCGCCGCCTACACTGCTCCCGTTGCTGCTGCCTATACCGCTCCAGTGGCT
GCTGCTTATACCGCTCCAGTGGCCGCTGCGTACGCCGCCCCAGCTGCCTA
TACCGCTGCCTACACCGCCCCCATTGCCCGTTATGCCGCCACCCCCTTCG
CAGCACCCATCGCCGCTCCCGTGGCTGCCGCCTACACCGCCCCCATCGCC
GCCGCTGCCCCAGTTCTGCTGAAGAAGGCAAGCTTTCTAGACCAT
BO34729.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:30:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13674-RB | 414 | CG13674-PB | 1..411 | 17..427 | 2055 | 100 | Plus |
CG13674-RA | 414 | CG13674-PA | 1..411 | 17..427 | 2055 | 100 | Plus |
CG13679-RB | 360 | CG13679-PB | 1..266 | 17..267 | 830 | 88.3 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:30:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13674-RB | 559 | CG13674-RB | 65..477 | 15..427 | 2065 | 100 | Plus |
CG13674-RA | 687 | CG13674-RA | 65..477 | 15..427 | 2065 | 100 | Plus |
CG13679-RB | 489 | CG13679-RB | 66..333 | 15..267 | 840 | 88.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:30:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 8218442..8218843 | 427..26 | 2010 | 100 | Minus |
3L | 28110227 | 3L | 8202934..8203189 | 27..267 | 795 | 88.3 | Plus |
3L | 28110227 | 3L | 8222536..8222651 | 83..198 | 550 | 98.3 | Plus |
3L | 28110227 | 3L | 8222475..8222532 | 37..94 | 230 | 93.1 | Plus |
3L | 28110227 | 3L | 8203128..8203186 | 230..288 | 190 | 88.1 | Plus |
Blast to na_te.dros performed 2014-11-28 14:30:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
roo | 9092 | roo DM_ROO 9092bp | 1061..1148 | 308..221 | 134 | 61.4 | Minus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6757..6850 | 309..213 | 127 | 60.8 | Minus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6734..6828 | 308..214 | 124 | 58.9 | Minus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6724..6817 | 309..213 | 118 | 59.8 | Minus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2312..2374 | 279..214 | 116 | 66.7 | Minus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2778..2856 | 296..221 | 109 | 62 | Minus |
BO34729.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-10-29 16:46:48 Download gff for
BO34729.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13674-RA | 67..477 | 17..429 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:15:33 Download gff for
BO34729.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13674-RA | 67..477 | 17..429 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:15:33 Download gff for
BO34729.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 8218440..8218847 | 22..429 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-10-29 16:46:48 Download gff for
BO34729.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 8211540..8211947 | 22..429 | 99 | | Minus |
BO34729.pep Sequence
Translation from 16 to 445
> BO34729.pep
MKFLAVCFFAVVAVAAAKPGIVAPLAYTAPAVVGSAAYVAPYASSYTANS
VAHSAAFPAAYTAAYTAPVAAAYTAPVAAAYTAPVAAAYAAPAAYTAAYT
APIARYAATPFAAPIAAPVAAAYTAPIAAAAPVLLKKASFLDH
BO34729.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:42:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13674-PB | 137 | CG13674-PB | 1..137 | 1..137 | 673 | 100 | Plus |
CG13674-PA | 137 | CG13674-PA | 1..137 | 1..137 | 673 | 100 | Plus |
CG13679-PB | 119 | CG13679-PB | 1..115 | 1..119 | 426 | 74.2 | Plus |
CG13678-PA | 128 | CG13678-PA | 3..128 | 2..137 | 362 | 63.7 | Plus |
CG13047-PB | 170 | CG13047-PB | 3..165 | 2..132 | 208 | 41.8 | Plus |