BO34741.complete Sequence
658 bp assembled on 2013-10-29
GenBank Submission: KX799868
> BO34741.complete
GAAGTTATCAGTCGACATGCACGGATCGGAGCCGACATTGGATTGGGGCA
GCGGCTTCGGCCTGCACATAGCCATCTATTTGGCCCTGGTGTTCTTCTTT
TTCTGCGTACTACCGCTGGCCTGCTACTACATCCGCGTAGAGAGCCAAAC
TCTGGCAAAGATCTGCCAGCCGCGATGTCGACGTCAGCAGAGGATTCCAG
AGCACCATCGTCAGCGATACGGCATTGAAATTGATCGTAATGTATTCAAC
GCACAGGAGGATCCTTCATCGAACCGCTATGGCGACATTTTCTTCATCGA
ACCCGGCAGCGTGGAGGCCAACCGCATTCGCGATCAACTGGAAAAGGATG
AAAAGGATTTACCCAGCTACGACGAGGTGATGCGCATGTGTAACCTGACC
ACTCCCACAGCAGCAGCGGCTGGAATGCCTGTTCCCCAATCGCCCCTCGG
TGTACCCAGTCCCATTGGAATCGCGGCACTGCCGGCGCCACCGTATTCGG
AGACAGATCCACATTCCTCGTCCGCCGCAGAAGCCACTGTCATCGCAATG
GAACCGATGGAGCCATCCACCTCCCGCGCGGCACAGATTCCACCCAGCTC
CGGATCTGGTCCTCCTGCTCCATTGCCAACGACAGCGGTGGCAAGCTTTC
TAGACCAT
BO34741.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:30:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12963-RF | 627 | CG12963-PF | 1..624 | 17..640 | 3120 | 100 | Plus |
CG12963-RJ | 540 | CG12963-PJ | 129..537 | 232..640 | 2045 | 100 | Plus |
CG12963-RH | 594 | CG12963-PH | 183..591 | 232..640 | 2045 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:30:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12963-RF | 1136 | CG12963-RF | 297..921 | 16..640 | 3125 | 100 | Plus |
CG12963-RJ | 782 | CG12963-RJ | 159..567 | 232..640 | 2045 | 100 | Plus |
CG12963-RH | 867 | CG12963-RH | 244..652 | 232..640 | 2045 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:30:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 15561814..15562221 | 233..640 | 2040 | 100 | Plus |
2R | 25286936 | 2R | 15560896..15561113 | 16..233 | 1090 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 14:30:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dbuz\Osvaldo | 9045 | Dbuz\Osvaldo DBU133521 9045bp Derived from AJ133521 (Rel. 60, Last updated, Version 2). | 3427..3468 | 347..306 | 111 | 73.8 | Minus |
BO34741.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-10-29 16:46:40 Download gff for
BO34741.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12963-RF | 298..921 | 17..642 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:15:26 Download gff for
BO34741.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12963-RF | 298..921 | 17..642 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:15:26 Download gff for
BO34741.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 15560897..15561113 | 17..233 | 100 | -> | Plus |
2R | 15561815..15562221 | 234..642 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-10-29 16:46:40 Download gff for
BO34741.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 11448402..11448618 | 17..233 | 100 | -> | Plus |
arm_2R | 11449320..11449726 | 234..642 | 99 | | Plus |
BO34741.pep Sequence
Translation from 16 to 658
> BO34741.pep
MHGSEPTLDWGSGFGLHIAIYLALVFFFFCVLPLACYYIRVESQTLAKIC
QPRCRRQQRIPEHHRQRYGIEIDRNVFNAQEDPSSNRYGDIFFIEPGSVE
ANRIRDQLEKDEKDLPSYDEVMRMCNLTTPTAAAAGMPVPQSPLGVPSPI
GIAALPAPPYSETDPHSSSAAEATVIAMEPMEPSTSRAAQIPPSSGSGPP
APLPTTAVASFLDH
BO34741.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:53:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12963-PF | 208 | CG12963-PF | 1..208 | 1..208 | 1103 | 100 | Plus |
CG12963-PH | 197 | CG12963-PH | 7..197 | 21..208 | 740 | 77.5 | Plus |
CG12963-PA | 190 | CG12963-PA | 1..190 | 20..208 | 719 | 77 | Plus |
CG12963-PJ | 179 | CG12963-PJ | 2..179 | 13..208 | 718 | 75 | Plus |
CG12963-PC | 178 | CG12963-PC | 37..178 | 67..208 | 712 | 97.2 | Plus |