Clone BO34741 Report

Search the DGRC for BO34741

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:347
Well:41
Vector:pDNR-Dual
Associated Gene/TranscriptCG12963-RF
Protein status:BO34741.pep: Imported from assembly
Sequenced Size:658

Clone Sequence Records

BO34741.complete Sequence

658 bp assembled on 2013-10-29

GenBank Submission: KX799868

> BO34741.complete
GAAGTTATCAGTCGACATGCACGGATCGGAGCCGACATTGGATTGGGGCA
GCGGCTTCGGCCTGCACATAGCCATCTATTTGGCCCTGGTGTTCTTCTTT
TTCTGCGTACTACCGCTGGCCTGCTACTACATCCGCGTAGAGAGCCAAAC
TCTGGCAAAGATCTGCCAGCCGCGATGTCGACGTCAGCAGAGGATTCCAG
AGCACCATCGTCAGCGATACGGCATTGAAATTGATCGTAATGTATTCAAC
GCACAGGAGGATCCTTCATCGAACCGCTATGGCGACATTTTCTTCATCGA
ACCCGGCAGCGTGGAGGCCAACCGCATTCGCGATCAACTGGAAAAGGATG
AAAAGGATTTACCCAGCTACGACGAGGTGATGCGCATGTGTAACCTGACC
ACTCCCACAGCAGCAGCGGCTGGAATGCCTGTTCCCCAATCGCCCCTCGG
TGTACCCAGTCCCATTGGAATCGCGGCACTGCCGGCGCCACCGTATTCGG
AGACAGATCCACATTCCTCGTCCGCCGCAGAAGCCACTGTCATCGCAATG
GAACCGATGGAGCCATCCACCTCCCGCGCGGCACAGATTCCACCCAGCTC
CGGATCTGGTCCTCCTGCTCCATTGCCAACGACAGCGGTGGCAAGCTTTC
TAGACCAT

BO34741.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:30:10
Subject Length Description Subject Range Query Range Score Percent Strand
CG12963-RF 627 CG12963-PF 1..624 17..640 3120 100 Plus
CG12963-RJ 540 CG12963-PJ 129..537 232..640 2045 100 Plus
CG12963-RH 594 CG12963-PH 183..591 232..640 2045 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:30:11
Subject Length Description Subject Range Query Range Score Percent Strand
CG12963-RF 1136 CG12963-RF 297..921 16..640 3125 100 Plus
CG12963-RJ 782 CG12963-RJ 159..567 232..640 2045 100 Plus
CG12963-RH 867 CG12963-RH 244..652 232..640 2045 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:30:08
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 15561814..15562221 233..640 2040 100 Plus
2R 25286936 2R 15560896..15561113 16..233 1090 100 Plus
Blast to na_te.dros performed 2014-11-28 14:30:09
Subject Length Description Subject Range Query Range Score Percent Strand
Dbuz\Osvaldo 9045 Dbuz\Osvaldo DBU133521 9045bp Derived from AJ133521 (Rel. 60, Last updated, Version 2). 3427..3468 347..306 111 73.8 Minus

BO34741.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-10-29 16:46:40 Download gff for BO34741.complete
Subject Subject Range Query Range Percent Splice Strand
CG12963-RF 298..921 17..642 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:15:26 Download gff for BO34741.complete
Subject Subject Range Query Range Percent Splice Strand
CG12963-RF 298..921 17..642 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:15:26 Download gff for BO34741.complete
Subject Subject Range Query Range Percent Splice Strand
2R 15560897..15561113 17..233 100 -> Plus
2R 15561815..15562221 234..642 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-10-29 16:46:40 Download gff for BO34741.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 11448402..11448618 17..233 100 -> Plus
arm_2R 11449320..11449726 234..642 99   Plus

BO34741.pep Sequence

Translation from 16 to 658

> BO34741.pep
MHGSEPTLDWGSGFGLHIAIYLALVFFFFCVLPLACYYIRVESQTLAKIC
QPRCRRQQRIPEHHRQRYGIEIDRNVFNAQEDPSSNRYGDIFFIEPGSVE
ANRIRDQLEKDEKDLPSYDEVMRMCNLTTPTAAAAGMPVPQSPLGVPSPI
GIAALPAPPYSETDPHSSSAAEATVIAMEPMEPSTSRAAQIPPSSGSGPP
APLPTTAVASFLDH

BO34741.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:53:51
Subject Length Description Subject Range Query Range Score Percent Strand
CG12963-PF 208 CG12963-PF 1..208 1..208 1103 100 Plus
CG12963-PH 197 CG12963-PH 7..197 21..208 740 77.5 Plus
CG12963-PA 190 CG12963-PA 1..190 20..208 719 77 Plus
CG12963-PJ 179 CG12963-PJ 2..179 13..208 718 75 Plus
CG12963-PC 178 CG12963-PC 37..178 67..208 712 97.2 Plus