BO34743.complete Sequence
496 bp assembled on 2013-10-29
GenBank Submission: KX793975
> BO34743.complete
GAAGTTATCAGTCGACATGATCATGATTGCAATCTCAAACTTGGAGCAGT
TAATTTTGTTGTACTGGTTTTCTTTAAGCGACATATCTAACTCTTTCACT
TCTTTGCCAGCCATCCAGTGCAGCTATGAGACCGCCGTCCGTGGAATGGC
ATCGCTGCAGCAGATGCACCGCAGCGGACCGCACATAAAGACGCGTCCGC
CGCGCCAGCCGCTGGATGGAAAGCCCTTCGCCAAGGGCGTTGTCCTGAAG
ACGCTGATAAAGAAGCCCAAGAAGCCGAACTCGGCCAATCGAAAGTGCGT
GCTGGTGCGCCTCTCCACCGGCAAGGAGATGGTGGCCTACATCCCCGGCA
TCGGGCACAACCTGCAAGAGCACAACATTGTACTGTGCCGCGTGGGGCGT
CTGCAGGACGTGCCCGGCGTTAAGCTGAAGGCTGTGCGCGGAGTCTACGA
CTTGGCGCACGTCGTCAAGAAGAGCCAAGCAAGCTTTCTAGACCAT
BO34743.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:30:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| tko-RC | 465 | CG7925-PC | 1..462 | 17..478 | 2310 | 100 | Plus |
| tko-RB | 423 | CG7925-PB | 52..420 | 110..478 | 1845 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:30:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| tko-RC | 1596 | CG7925-RC | 1083..1544 | 17..478 | 2310 | 100 | Plus |
| tko-RB | 663 | CG7925-RB | 243..611 | 110..478 | 1845 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:30:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 2442365..2442826 | 478..17 | 2310 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 14:30:46 has no hits.
BO34743.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-10-29 16:46:54 Download gff for
BO34743.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| tko-RC | 1083..1544 | 17..480 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:15:41 Download gff for
BO34743.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| tko-RC | 1083..1544 | 17..480 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:15:41 Download gff for
BO34743.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 2442363..2442826 | 17..480 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-10-29 16:46:54 Download gff for
BO34743.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 2336396..2336859 | 17..480 | 99 | | Minus |
BO34743.pep Sequence
Translation from 16 to 496
> BO34743.pep
MIMIAISNLEQLILLYWFSLSDISNSFTSLPAIQCSYETAVRGMASLQQM
HRSGPHIKTRPPRQPLDGKPFAKGVVLKTLIKKPKKPNSANRKCVLVRLS
TGKEMVAYIPGIGHNLQEHNIVLCRVGRLQDVPGVKLKAVRGVYDLAHVV
KKSQASFLDH
BO34743.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:42:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| tko-PC | 154 | CG7925-PC | 1..154 | 1..154 | 791 | 100 | Plus |
| tko-PB | 140 | CG7925-PB | 18..140 | 32..154 | 639 | 100 | Plus |
| RpS23-PA | 143 | CG8415-PA | 31..124 | 56..141 | 138 | 39.4 | Plus |
| RpS23-PB | 143 | CG8415-PB | 31..124 | 56..141 | 138 | 39.4 | Plus |
