Clone BO34748 Report

Search the DGRC for BO34748

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:347
Well:48
Vector:pDNR-Dual
Associated Gene/Transcriptpod1-RG
Protein status:BO34748.pep: Imported from assembly
Sequenced Size:3832

Clone Sequence Records

BO34748.complete Sequence

3832 bp assembled on 2014-03-03

GenBank Submission: KX795824

> BO34748.complete
GAAGTTATCAGTCGACATGGCCTGGCGATTCAAGGCTTCCAAGTACAAAA
ATGCCGCACCCATTGTGCCCAAGGCGGAGGCATGCGTCCGCGAGATCTGC
GTGGGCAGCTACCAGACGTACGGTAACAACATCGCCGCCTCCGGCGCCTT
CATGGCCTTCAACTGGGAGCACACCGGGTCCAGCGTCGCTGTCCTCCCGC
TGGACGACTGCGGCCGGAAGAGCAAGACCATGCCGCTGCTCCATGGACAC
ACGGACACAGTGACGGACCTTAAGTTCTCCCCGTTCCACGACGGGCTGCT
GGCCACCGCCTCGCAGGATTGCCTGGTCAAGATCTGGCACATACCGGAAA
AAGGTCTGGAGCAGTCGCTTTCCGATCCGGAGGCAATCTTCTCACACAAG
CAGAGACGCGTAGAGACAGTGGGCTTCCATCCAACAGCAGATGGTTTGAT
GTACTCCACAGCCGCCGGCTGCGTGGCTCTCTTCGATCTCAGCACTCAAA
AGGAGATATTCTCGAACAATGAGCACCCCGAGGTGATACAGTCGGCCAGT
TGGCGCGAGGACGGTTCTGTTTTGGCCACCAGTTGCAAGGATAAGAATGT
GCGAATCTTCGATCCCCGTGCCGCTGGTTCACCCATCCAGCTGACTGCTG
AATCGCATCAGAGCATCAAGGATTCGCGGGTGGTGTGGTTAGGCAATCAG
CATCGCATCCTGACCACTGGCTTCGATGCGGCCCGCCTGCGACAGGTGAT
CATCCGTGATGTGCGCAACTTCAACACTCCAGAGAAAACTCTCGAACTGG
ACTGCTCGACGGGCATATTGATGCCCCTCTTCGATCCCGACACCAATATG
CTTTTCCTAGCCGGAAAGGGTGACACAACCATTAACTATTTGGAGATTAC
GGACAAGGATCCGTATTTGATTGAGGGCTTGCGTCATACTGGCGAGCAGA
CGAAGGGAGCTTGTCTCGTGCCCAAGCGGGCACTTAAAGTCATGGAAGCA
GAGGTTAACCGGGTGTTGCAATTGACCTCCAACATGGTCATACCCATCAT
GTACCAGGTGCCCAGAAAGACATACCGTGATTTCCACGCCGATCTATATC
CGGAGACCACTGGCTACAAGACAGAACTGGTGGCCGGCGAGTGGCTAAAT
GGCAGCAACCAGGCGGTGCCCAAGATGAGCCTTGATCCCGCCAAGCGTGA
GCATGGCGATGAGCCAATTATTATTCATCGCGGTAACCTGAGTGATTTTG
TTAAGAACCTGGAGAATCAGCGGGCCAAGAGCAACACCACTGGGAAACCC
AATCAGCAGGCCAAGCGCAACGATAACGAGCACTTTGTCATGCTAAACAC
GGGCAATAACTTTGAGGAGAAGAACGGCAATGACAACAGCAACGAGAGCA
ACGGAAAGAAGAGCACACCTTCACAGTCCCAGCCAGATGGCGAGTGCAGT
GAGCTCATCCGTAAGTTCGAGGCAAAATACAAGGTGGATTCGGAGAAGGA
AAAGGCCCATGCCTACGCCCAGTCTCACGAGGATGACAAGGAGTCACCCA
CTGAGCACGAGCATTCGACCGGCAGCAGCGAGGAGGTCTCCTCCTCCGGT
GGACTGGACAACCATTCGGCCAGTGGCAGCCACTCGCCACCGAAGCCCAT
GCCGCGCACATCGCGCAGCAATTCCCTTCCGGAGGCCAGTGATTCCGCTG
GGGAAAGCAGCAGCACCAACACGCCGCGCCCGAGGCCTCGCACCACCGCT
GCGTCTGCATACAAGCCACGTTTGGGTCCCAAGCCCTTCTCCAGCACCAC
AGGTGACGTTTCGTTTGACAAGGTGTTCGCCGTTCCCTTGGCACCGGGAT
CCCACGAGAATATCTCGAACGTGGGTCAGGACAGCGGAGTGGAGATGACA
CCAGCTCAGGGAGCCAAACCGGATCTCATTGTGGAAATCGAAATTAAAAA
GAAACACGAAAGGGAACCTGCTGTGTCCGGAAATGGAGTCCAGAAGTCAC
TGACCACTTCGGAGCGCCGTAAGTCCTCGGCTGACGATGATGAATCATCC
GACAAGATATTCGAGCAGAACTCTGAGTCATCGGAGAACTCGACGGAGGG
GGAAGATCGCACGGATGCGGATCTGCGAAGAAACTGCACCTCCAGGAGCA
GCTTTGCCGAGCGACGGCGCATATACGAGAATCGTTCCAAGAGTCAGGTG
GACGAGAAGCCTCAGTCGCCAGTGCCATTACGTCGCGAGCACTCCAAAGT
GGAGCCGCTGAAGCCCAACCAACAGCAGCAGCAGCAGGGCAATGTGATCG
ACACCAAGCGCATCTCTGTTCCAGAGGGCAAATTAATGGAGGAGCATCGC
CGCGGAAATGGCGCTGGACTCAAGAAGTCCGCCACTGAGGCGGCTTTTAG
CGCTGCCAGCACCAAGCGCACTTCCACCGTCTTCGGCAAGGTGTCCAAGT
TCAGGCACTTGAAGGGCACACCCGGTCACAAGTCCACGCACATCGAGAAC
TTGCGCAATCTAAGTCGCCAGATTCCGGGCGAATGCAATGGCTTCCACGC
TAACCAGGAGCGAGTTGCCGTGCCACTTTCGGGGCCCGGCGGCAAGATAG
CCATCTTTGAGTTGAGCCGCCCTGGACGGTTGCCCGATGGTGTGATTCCG
TCACTTGTGAACGGCAGCAACATCATGGACTTCCAGTGGGATCCGTTCGA
TGCCCAGCGATTGGCTGTGGCATGCGACGATGGCATTGTAAAGATCTGGC
ATATTGAAGCCGGTGGATTGAGTGAGCCGACAAACACACCTGCCGGCGAG
CTAACCGCTCATCTGGACAAGATTTACTTCATACGCTTCCACCCGCTGGC
TGCTGATGTTCTGTTAACCGCCAGCTACGATATGACCATCAAGCTGTGGG
ATTTGCGCACCATGACCGAGAAATGCTCGCTTTCGGGGCATACAGATCAA
ATCTTTGACTTCGCCTGGAGTCCCTGCGGCCGATTGGGCGCCACCGTGTG
CAAGGATGGCAAGATTAGGGTGTACAACCCAAGGAAATCGGAGACACCCA
TACGGGAGGGCAATGGACCGGTCGGTACTCGTGGAGCTCGGATCACCTGG
GCGTTGGAGGGACATTACATCGTCTGCACTGGTTTTGACAAGGTTTCGGA
GCGACAGATCAGCGTGTACAATGCACAAAAGTTGTCCGCCCCATTGAACA
CTGCCAGTTTGGATGTCTCACCCTCCATACTGATTCCATTCTATGACGAA
GATAGCTCCACACTGTTTGTTACGGGCAAGGGTGACTCCACAATCTACTG
TTACGAAATCACCGACGAGGAGCCGTACATCTGCCCACTGTCGCACCATC
GTTGCACCTCGCTGCACCAGGGCCTCAGTTTCCTCACCAAGAACCACTGC
GACGTGGCCAGCGTGGAGTTCTCAAAGGCCTATCGGCTAACCAATACCAC
AATTGAACCCCTGAGTTTCACAGTGCCCCGCATCAAGAGCGAGCTGTTCC
AAGACGATCTGTTCCCACCCACACGCATCACCTGGAGCGCCACACTGAGC
TCCGAGGATTGGTTCGCTAGCAATGATAAGGCGGCACCCAAAGTCAGCCT
CAAGCCCGAGGGCATGGAAACTTTATCTTCCATACAGCAAGTGCCAGCGC
AGCCCGTCAAGAAGCCAGATCATCCCCAGTTCGGTGGCCAGAAGTCCGAG
TACGAGATCAACAAACAGCAGGAGATCCAGAAATCGGTTAGCGCGCGCAT
GGAATTCACCACCAAGCTGGAGCAGGACGACATGGAGGGTGTGGATGAGA
ACGAGTGGCAGGAGGCAAGCTTTCTAGACCAT

BO34748.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:58:31
Subject Length Description Subject Range Query Range Score Percent Strand
pod1-RG 3801 CG4532-PG 1..3798 17..3814 18990 100 Plus
pod1-RF 3768 CG4532-PF 1..2007 17..2023 10035 100 Plus
pod1-RF 3768 CG4532-PF 2005..3765 2054..3814 8805 100 Plus
pod1-RD 3225 CG4532-PD 1462..3222 2054..3814 8805 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:58:33
Subject Length Description Subject Range Query Range Score Percent Strand
pod1-RG 6374 CG4532-RG 315..4113 16..3814 18995 100 Plus
pod1-RF 6031 CG4532-RF 315..2322 16..2023 10040 100 Plus
pod1-RF 6031 CG4532-RF 2320..4080 2054..3814 8805 100 Plus
pod1-RD 5837 CG4532-RD 1816..3576 2054..3814 8805 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:58:29
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 6809727..6810639 2230..3142 4565 100 Plus
X 23542271 X 6806881..6807437 513..1069 2785 100 Plus
X 23542271 X 6807799..6808341 1223..1765 2715 100 Plus
X 23542271 X 6810702..6811047 3142..3487 1730 100 Plus
X 23542271 X 6805909..6806220 16..327 1560 100 Plus
X 23542271 X 6806617..6806804 325..512 940 100 Plus
X 23542271 X 6808810..6808995 1764..1949 930 100 Plus
X 23542271 X 6809483..6809657 2055..2229 875 100 Plus
X 23542271 X 6807494..6807648 1068..1222 775 100 Plus
X 23542271 X 6811115..6811252 3486..3623 690 100 Plus
X 23542271 X 6811317..6811417 3624..3724 505 100 Plus
X 23542271 X 6811478..6811569 3723..3814 460 100 Plus
X 23542271 X 6809064..6809137 1950..2023 370 100 Plus
Blast to na_te.dros performed on 2014-11-28 14:58:30 has no hits.

BO34748.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-03-03 17:23:39 Download gff for BO34748.complete
Subject Subject Range Query Range Percent Splice Strand
pod1-RG 316..4113 17..3816 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:28:13 Download gff for BO34748.complete
Subject Subject Range Query Range Percent Splice Strand
pod1-RG 316..4113 17..3816 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:28:13 Download gff for BO34748.complete
Subject Subject Range Query Range Percent Splice Strand
X 6811480..6811569 3725..3816 97   Plus
X 6805910..6806218 17..325 100 -> Plus
X 6806618..6806804 326..512 100 -> Plus
X 6810702..6811047 3142..3487 100 -> Plus
X 6806881..6807437 513..1069 100 -> Plus
X 6807496..6807648 1070..1222 100 -> Plus
X 6807799..6808341 1223..1765 100 -> Plus
X 6808812..6808995 1766..1949 100 -> Plus
X 6809064..6809137 1950..2023 100 -> Plus
X 6809374..6809406 2024..2056 100 -> Plus
X 6809485..6809657 2057..2229 100 -> Plus
X 6809727..6810638 2230..3141 100 -> Plus
X 6811117..6811252 3488..3623 100 -> Plus
X 6811317..6811417 3624..3724 100 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2014-03-03 17:23:39 Download gff for BO34748.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 6705513..6705602 3725..3816 97   Plus
arm_X 6699943..6700251 17..325 100 -> Plus
arm_X 6700651..6700837 326..512 100 -> Plus
arm_X 6704735..6705080 3142..3487 100 -> Plus
arm_X 6700914..6701470 513..1069 100 -> Plus
arm_X 6701529..6701681 1070..1222 100 -> Plus
arm_X 6701832..6702374 1223..1765 100 -> Plus
arm_X 6702845..6703028 1766..1949 100 -> Plus
arm_X 6703097..6703170 1950..2023 100 -> Plus
arm_X 6703407..6703439 2024..2056 100 -> Plus
arm_X 6703518..6703690 2057..2229 100 -> Plus
arm_X 6703760..6704671 2230..3141 100 -> Plus
arm_X 6705150..6705285 3488..3623 100 -> Plus
arm_X 6705350..6705450 3624..3724 100 -> Plus

BO34748.pep Sequence

Translation from 16 to 3832

> BO34748.pep
MAWRFKASKYKNAAPIVPKAEACVREICVGSYQTYGNNIAASGAFMAFNW
EHTGSSVAVLPLDDCGRKSKTMPLLHGHTDTVTDLKFSPFHDGLLATASQ
DCLVKIWHIPEKGLEQSLSDPEAIFSHKQRRVETVGFHPTADGLMYSTAA
GCVALFDLSTQKEIFSNNEHPEVIQSASWREDGSVLATSCKDKNVRIFDP
RAAGSPIQLTAESHQSIKDSRVVWLGNQHRILTTGFDAARLRQVIIRDVR
NFNTPEKTLELDCSTGILMPLFDPDTNMLFLAGKGDTTINYLEITDKDPY
LIEGLRHTGEQTKGACLVPKRALKVMEAEVNRVLQLTSNMVIPIMYQVPR
KTYRDFHADLYPETTGYKTELVAGEWLNGSNQAVPKMSLDPAKREHGDEP
IIIHRGNLSDFVKNLENQRAKSNTTGKPNQQAKRNDNEHFVMLNTGNNFE
EKNGNDNSNESNGKKSTPSQSQPDGECSELIRKFEAKYKVDSEKEKAHAY
AQSHEDDKESPTEHEHSTGSSEEVSSSGGLDNHSASGSHSPPKPMPRTSR
SNSLPEASDSAGESSSTNTPRPRPRTTAASAYKPRLGPKPFSSTTGDVSF
DKVFAVPLAPGSHENISNVGQDSGVEMTPAQGAKPDLIVEIEIKKKHERE
PAVSGNGVQKSLTTSERRKSSADDDESSDKIFEQNSESSENSTEGEDRTD
ADLRRNCTSRSSFAERRRIYENRSKSQVDEKPQSPVPLRREHSKVEPLKP
NQQQQQQGNVIDTKRISVPEGKLMEEHRRGNGAGLKKSATEAAFSAASTK
RTSTVFGKVSKFRHLKGTPGHKSTHIENLRNLSRQIPGECNGFHANQERV
AVPLSGPGGKIAIFELSRPGRLPDGVIPSLVNGSNIMDFQWDPFDAQRLA
VACDDGIVKIWHIEAGGLSEPTNTPAGELTAHLDKIYFIRFHPLAADVLL
TASYDMTIKLWDLRTMTEKCSLSGHTDQIFDFAWSPCGRLGATVCKDGKI
RVYNPRKSETPIREGNGPVGTRGARITWALEGHYIVCTGFDKVSERQISV
YNAQKLSAPLNTASLDVSPSILIPFYDEDSSTLFVTGKGDSTIYCYEITD
EEPYICPLSHHRCTSLHQGLSFLTKNHCDVASVEFSKAYRLTNTTIEPLS
FTVPRIKSELFQDDLFPPTRITWSATLSSEDWFASNDKAAPKVSLKPEGM
ETLSSIQQVPAQPVKKPDHPQFGGQKSEYEINKQQEIQKSVSARMEFTTK
LEQDDMEGVDENEWQEASFLDH

BO34748.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:58:36
Subject Length Description Subject Range Query Range Score Percent Strand
pod1-PG 1266 CG4532-PG 1..1266 1..1266 6656 100 Plus
pod1-PF 1255 CG4532-PF 1..1255 1..1266 6580 99.1 Plus
pod1-PD 1074 CG4532-PD 403..1074 584..1266 3508 98.4 Plus
pod1-PC 1074 CG4532-PC 403..1074 584..1266 3508 98.4 Plus
pod1-PB 1074 CG4532-PB 403..1074 584..1266 3508 98.4 Plus
pod1-PD 1074 CG4532-PD 1..577 1..607 2136 73.8 Plus
pod1-PC 1074 CG4532-PC 1..577 1..607 2136 73.8 Plus
pod1-PD 1074 CG4532-PD 54..395 858..1201 442 30.7 Plus
pod1-PD 1074 CG4532-PD 666..1009 54..395 442 30.7 Plus
pod1-PC 1074 CG4532-PC 54..395 858..1201 442 30.7 Plus
pod1-PC 1074 CG4532-PC 666..1009 54..395 442 30.7 Plus