BO34750.complete Sequence
313 bp assembled on 2013-10-29
GenBank Submission: KX794476
> BO34750.complete
GAAGTTATCAGTCGACATGGCGGATGTCCTGGAGAAAAGCTCACTGCTGG
ATGCTGTGCCACCACTAGGCGACCCCCACCCACCGCTGCCCCACCAGCAG
CTGCAACAGGAAGCAGCAGCAGCAGCAGCAGCAAATGCCGCACCACCAGC
ACCACCGCAGCAGCAACAACCACCACCCCATCAGCTGCAGCAGCAGCAGC
CGCAACAACAGCAACTGCAACAGAAGCCAGCAAATGCGAGGGCTAATCAG
GATCAAAAAGAATCGTCAGGAAATCAAACTAATTCAGTCCTAGAGGCAAG
CTTTCTAGACCAT
BO34750.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:31:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
tau-RE | 282 | CG45110-PE | 1..279 | 17..295 | 1395 | 100 | Plus |
tau-RM | 1104 | CG45110-PM | 1..245 | 17..261 | 1225 | 100 | Plus |
tau-RJ | 927 | CG45110-PJ | 1..245 | 17..261 | 1225 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:31:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
tau-RE | 1343 | CG45110-RE | 347..625 | 17..295 | 1395 | 100 | Plus |
tau-RM | 2261 | CG45110-RM | 366..610 | 17..261 | 1225 | 100 | Plus |
tau-RJ | 2084 | CG45110-RJ | 366..610 | 17..261 | 1225 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:31:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 27656206..27656449 | 260..17 | 1220 | 100 | Minus |
3R | 32079331 | 3R | 27651572..27651610 | 295..257 | 195 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 14:31:01 has no hits.
BO34750.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-10-29 16:46:58 Download gff for
BO34750.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
tau-RE | 347..625 | 17..297 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:15:47 Download gff for
BO34750.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
tau-RE | 347..625 | 17..297 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:15:47 Download gff for
BO34750.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 27651570..27651606 | 261..297 | 94 | <- | Minus |
3R | 27656206..27656449 | 17..260 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-10-29 16:46:58 Download gff for
BO34750.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 23477292..23477328 | 261..297 | 94 | <- | Minus |
arm_3R | 23481928..23482171 | 17..260 | 100 | | Minus |
BO34750.pep Sequence
Translation from 16 to 313
> BO34750.pep
MADVLEKSSLLDAVPPLGDPHPPLPHQQLQQEAAAAAAANAAPPAPPQQQ
QPPPHQLQQQQPQQQQLQQKPANARANQDQKESSGNQTNSVLEASFLDH
BO34750.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:42:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
tau-PE | 93 | CG45110-PE | 1..93 | 1..93 | 483 | 100 | Plus |
tau-PH | 288 | CG45110-PH | 1..86 | 1..86 | 431 | 95.3 | Plus |
tau-PJ | 308 | CG45110-PJ | 1..86 | 1..86 | 431 | 95.3 | Plus |
tau-PC | 349 | CG45110-PC | 1..86 | 1..86 | 431 | 95.3 | Plus |
tau-PI | 350 | CG45110-PI | 1..86 | 1..86 | 431 | 95.3 | Plus |