BO34757.complete Sequence
295 bp assembled on 2013-10-29
GenBank Submission: KX795788
> BO34757.complete
GAAGTTATCAGTCGACATGACATCACGGACGCGCCACTGTGCCCGACTGG
GGATCGTTCTCCTTGGGATCTGTTGCATCGCCAGCGGAATTTACCTCTTC
CGCAACTGGATCGATATGTTTACACGCATGCGCGGCCAGACCTTTGGGTT
AAGTTTCGCAAGCCGGCAAATTGGCAATGTGTGCAGAGGTCAACTGGGAG
ACTCATTTGCATACCACTTGGATTGGGAGGCAACAATTTTTTCCATTGAT
TTAAAGCAAAGACGAACGCAAAGACACGCAAGCTTTCTAGACCAT
BO34757.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:31:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
pes-RE | 264 | CG7228-PE | 1..261 | 17..277 | 1305 | 100 | Plus |
pes-RF | 1668 | CG7228-PF | 1..123 | 17..139 | 615 | 100 | Plus |
pes-RH | 1668 | CG7228-PH | 1..123 | 17..139 | 615 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:31:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
pes-RE | 519 | CG7228-RE | 101..361 | 17..277 | 1305 | 100 | Plus |
pes-RF | 2532 | CG7228-RF | 101..223 | 17..139 | 615 | 100 | Plus |
pes-RH | 2653 | CG7228-RH | 222..344 | 17..139 | 615 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:31:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 7991122..7991262 | 277..137 | 705 | 100 | Minus |
2L | 23513712 | 2L | 7991358..7991480 | 139..17 | 615 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 14:31:23 has no hits.
BO34757.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-10-29 16:47:08 Download gff for
BO34757.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
pes-RE | 101..361 | 17..279 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:16:00 Download gff for
BO34757.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
pes-RE | 101..361 | 17..279 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:16:00 Download gff for
BO34757.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 7991119..7991259 | 140..279 | 98 | <- | Minus |
2L | 7991358..7991480 | 17..139 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-10-29 16:47:08 Download gff for
BO34757.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 7991119..7991259 | 140..279 | 98 | <- | Minus |
arm_2L | 7991358..7991480 | 17..139 | 100 | | Minus |
BO34757.pep Sequence
Translation from 16 to 295
> BO34757.pep
MTSRTRHCARLGIVLLGICCIASGIYLFRNWIDMFTRMRGQTFGLSFASR
QIGNVCRGQLGDSFAYHLDWEATIFSIDLKQRRTQRHASFLDH
BO34757.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:42:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
pes-PE | 87 | CG7228-PE | 1..87 | 1..87 | 467 | 100 | Plus |
pes-PF | 555 | CG7228-PF | 1..50 | 1..50 | 232 | 90 | Plus |
pes-PH | 555 | CG7228-PH | 1..50 | 1..50 | 232 | 90 | Plus |
pes-PG | 555 | CG7228-PG | 1..50 | 1..50 | 232 | 90 | Plus |
pes-PD | 555 | CG7228-PD | 1..50 | 1..50 | 232 | 90 | Plus |