BO34766.complete Sequence
604 bp assembled on 2013-10-29
GenBank Submission: KX795454
> BO34766.complete
GAAGTTATCAGTCGACATGATTTCGTTTTGCATTTCATCGCTTTTATCAG
TGTGTATTTTTGCAAACCTTTACAATGGTTGTGCGGCAAAGCCCAACTGG
GAGGCAACGCCATTGTCGATTGGTGGCACCACCACAAATCCCAGTGCCAT
GGACATGAATCTGCGAATTGAGCGCATTTCAAGGTCGGAATTCGGGTTTT
CAGGCACATTCTTCTGGAATATTGATGTGGACGATAGCGTGATGGTCGAG
ATGCGTATTCTGAGCAGTTACTCCGGTGACGAGTCCGATTACAAACTGAC
TCCCATGTCCATTCAACCGCAGAAATTCACCGAATATGTCAATACCTTTT
ACAAGGACCTGTTGTTGCCGAATCTGGGCAATTGCACCGATTTGCCCGTC
TATGAAAATGAATTTGTACCACCCTGGCCCAAGGCGACCTACAATTTCAC
CCGCTGCGCTCTGAACGGCCAAGGATTGCCGGATATTTTGGCAGATGGCT
TCTATAAAGGCGAAGCCGTCATCACCGCCCAGCCAAATCTTGAAGTCACC
GTGTCCGTCGTTCTGCGGATCAGAACGAAAATGTTCGCAAGCTTTCTAGA
CCAT
BO34766.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:31:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG18540-RB | 573 | CG18540-PB | 1..570 | 17..586 | 2850 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:31:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG18540-RB | 627 | CG18540-RB | 17..586 | 17..586 | 2850 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:31:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 18299689..18300031 | 244..586 | 1715 | 100 | Plus |
| 2R | 25286936 | 2R | 18299474..18299630 | 90..246 | 785 | 100 | Plus |
| 2R | 25286936 | 2R | 18299333..18299407 | 17..91 | 375 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 14:31:44 has no hits.
BO34766.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-10-29 16:47:20 Download gff for
BO34766.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18540-RB | 17..586 | 17..588 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:16:12 Download gff for
BO34766.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18540-RB | 17..586 | 17..588 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:16:12 Download gff for
BO34766.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 18299333..18299407 | 17..91 | 100 | -> | Plus |
| 2R | 18299476..18299628 | 92..244 | 100 | -> | Plus |
| 2R | 18299690..18300031 | 245..588 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-10-29 16:47:20 Download gff for
BO34766.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 14186838..14186912 | 17..91 | 100 | -> | Plus |
| arm_2R | 14186981..14187133 | 92..244 | 100 | -> | Plus |
| arm_2R | 14187195..14187536 | 245..588 | 99 | | Plus |
BO34766.pep Sequence
Translation from 16 to 604
> BO34766.pep
MISFCISSLLSVCIFANLYNGCAAKPNWEATPLSIGGTTTNPSAMDMNLR
IERISRSEFGFSGTFFWNIDVDDSVMVEMRILSSYSGDESDYKLTPMSIQ
PQKFTEYVNTFYKDLLLPNLGNCTDLPVYENEFVPPWPKATYNFTRCALN
GQGLPDILADGFYKGEAVITAQPNLEVTVSVVLRIRTKMFASFLDH
BO34766.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:43:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG18540-PB | 190 | CG18540-PB | 1..190 | 1..190 | 1007 | 100 | Plus |
| CG18539-PB | 185 | CG18539-PB | 1..178 | 1..181 | 394 | 42 | Plus |
| CG18536-PA | 191 | CG18536-PA | 16..165 | 12..164 | 376 | 44.4 | Plus |
| CG14502-PD | 188 | CG14502-PD | 22..187 | 22..189 | 337 | 36.3 | Plus |
| CG14502-PC | 188 | CG14502-PC | 22..187 | 22..189 | 337 | 36.3 | Plus |
