Clone BO34767 Report

Search the DGRC for BO34767

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:347
Well:67
Vector:pDNR-Dual
Associated Gene/TranscriptCG33914-RB
Protein status:BO34767.pep: Imported from assembly
Sequenced Size:601

Clone Sequence Records

BO34767.complete Sequence

601 bp assembled on 2013-10-29

GenBank Submission: KX799588

> BO34767.complete
GAAGTTATCAGTCGACATGGGTGGCGCTGGCGGAAAACTTCTTGGACTGC
TGCTGTGTTTGCTATTTCTAACAGAGTTGCATGGAGTCTTCATGAGGTTC
ACCAATGTAACCTGCGAGAGCAAGGACCTCAGCATGAGTATCGTGGAGTA
CTGTGCGGTTACTACGCTGAGCAAGAATAAAAACAGCATTAGCCTTCGGT
ACGCTATGCTCAAGCCTATGTTTACAAATATAGAGATCTACTTTCAGCTG
ATGACCAGGGGCAGTGAGAGTATCCACGCGGCTTCAAACTGGCAGCCCTT
CCTCCATACGATGAAACTTGATTTGTGTCGATTCTGGAAAAACCACCACA
ACCATTTGGCCAGAATGGTGTTTGAATTCATCGATGGGCACACAAACATG
AACCACACTTGCCCCTATACCAAAGAAAAATACATTTCCATTGATGATTT
GACAAATACCGAAGTCTCCGCCAAGATCCGTGGAGTGCCAATGCCAAAGG
GTTTCTACGCCTTGTTCACCACGTGGTCCACTGAAAACATAACTCGAGTT
GTGACCAACTTTTACTTTGAAGTTATAAGCCCTGCAAGCTTTCTAGACCA
T

BO34767.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:31:48
Subject Length Description Subject Range Query Range Score Percent Strand
CG33914-RC 570 CG33914-PC 1..567 17..583 2835 100 Plus
CG33914-RB 570 CG33914-PB 1..567 17..583 2835 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:31:49
Subject Length Description Subject Range Query Range Score Percent Strand
CG33914-RC 2115 CG33914-RC 1382..1948 17..583 2835 100 Plus
CG33914-RB 961 CG33914-RB 228..794 17..583 2835 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:31:46
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 7037158..7037345 421..234 940 100 Minus
2R 25286936 2R 7036935..7037096 583..422 810 100 Minus
2R 25286936 2R 7037393..7037545 235..83 765 100 Minus
2R 25286936 2R 7037603..7037669 83..17 335 100 Minus
Blast to na_te.dros performed on 2014-11-28 14:31:47 has no hits.

BO34767.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-10-29 16:47:21 Download gff for BO34767.complete
Subject Subject Range Query Range Percent Splice Strand
CG33914-RB 228..794 17..585 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:16:13 Download gff for BO34767.complete
Subject Subject Range Query Range Percent Splice Strand
CG33914-RB 228..794 17..585 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:16:13 Download gff for BO34767.complete
Subject Subject Range Query Range Percent Splice Strand
2R 7036932..7037096 422..585 98 <- Minus
2R 7037158..7037343 236..421 100 <- Minus
2R 7037393..7037545 83..235 100 <- Minus
2R 7037604..7037669 17..82 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-10-29 16:47:21 Download gff for BO34767.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 2925109..2925174 17..82 100   Minus
arm_2R 2924663..2924848 236..421 100 <- Minus
arm_2R 2924898..2925050 83..235 100 <- Minus
arm_2R 2924437..2924601 422..585 98 <- Minus

BO34767.pep Sequence

Translation from 16 to 601

> BO34767.pep
MGGAGGKLLGLLLCLLFLTELHGVFMRFTNVTCESKDLSMSIVEYCAVTT
LSKNKNSISLRYAMLKPMFTNIEIYFQLMTRGSESIHAASNWQPFLHTMK
LDLCRFWKNHHNHLARMVFEFIDGHTNMNHTCPYTKEKYISIDDLTNTEV
SAKIRGVPMPKGFYALFTTWSTENITRVVTNFYFEVISPASFLDH

BO34767.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:43:07
Subject Length Description Subject Range Query Range Score Percent Strand
CG33914-PC 189 CG33914-PC 1..189 1..189 1011 100 Plus
CG33914-PB 189 CG33914-PB 1..189 1..189 1011 100 Plus
CG33632-PA 180 CG33632-PA 13..177 12..184 274 33.1 Plus
CG33689-PB 178 CG33689-PB 3..173 7..186 236 29.8 Plus
CG33453-PB 174 CG33453-PB 7..171 8..187 226 27.8 Plus