BO34767.complete Sequence
601 bp assembled on 2013-10-29
GenBank Submission: KX799588
> BO34767.complete
GAAGTTATCAGTCGACATGGGTGGCGCTGGCGGAAAACTTCTTGGACTGC
TGCTGTGTTTGCTATTTCTAACAGAGTTGCATGGAGTCTTCATGAGGTTC
ACCAATGTAACCTGCGAGAGCAAGGACCTCAGCATGAGTATCGTGGAGTA
CTGTGCGGTTACTACGCTGAGCAAGAATAAAAACAGCATTAGCCTTCGGT
ACGCTATGCTCAAGCCTATGTTTACAAATATAGAGATCTACTTTCAGCTG
ATGACCAGGGGCAGTGAGAGTATCCACGCGGCTTCAAACTGGCAGCCCTT
CCTCCATACGATGAAACTTGATTTGTGTCGATTCTGGAAAAACCACCACA
ACCATTTGGCCAGAATGGTGTTTGAATTCATCGATGGGCACACAAACATG
AACCACACTTGCCCCTATACCAAAGAAAAATACATTTCCATTGATGATTT
GACAAATACCGAAGTCTCCGCCAAGATCCGTGGAGTGCCAATGCCAAAGG
GTTTCTACGCCTTGTTCACCACGTGGTCCACTGAAAACATAACTCGAGTT
GTGACCAACTTTTACTTTGAAGTTATAAGCCCTGCAAGCTTTCTAGACCA
T
BO34767.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:31:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG33914-RC | 570 | CG33914-PC | 1..567 | 17..583 | 2835 | 100 | Plus |
CG33914-RB | 570 | CG33914-PB | 1..567 | 17..583 | 2835 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:31:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG33914-RC | 2115 | CG33914-RC | 1382..1948 | 17..583 | 2835 | 100 | Plus |
CG33914-RB | 961 | CG33914-RB | 228..794 | 17..583 | 2835 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:31:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 7037158..7037345 | 421..234 | 940 | 100 | Minus |
2R | 25286936 | 2R | 7036935..7037096 | 583..422 | 810 | 100 | Minus |
2R | 25286936 | 2R | 7037393..7037545 | 235..83 | 765 | 100 | Minus |
2R | 25286936 | 2R | 7037603..7037669 | 83..17 | 335 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 14:31:47 has no hits.
BO34767.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-10-29 16:47:21 Download gff for
BO34767.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33914-RB | 228..794 | 17..585 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:16:13 Download gff for
BO34767.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33914-RB | 228..794 | 17..585 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:16:13 Download gff for
BO34767.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 7036932..7037096 | 422..585 | 98 | <- | Minus |
2R | 7037158..7037343 | 236..421 | 100 | <- | Minus |
2R | 7037393..7037545 | 83..235 | 100 | <- | Minus |
2R | 7037604..7037669 | 17..82 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-10-29 16:47:21 Download gff for
BO34767.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 2925109..2925174 | 17..82 | 100 | | Minus |
arm_2R | 2924663..2924848 | 236..421 | 100 | <- | Minus |
arm_2R | 2924898..2925050 | 83..235 | 100 | <- | Minus |
arm_2R | 2924437..2924601 | 422..585 | 98 | <- | Minus |
BO34767.pep Sequence
Translation from 16 to 601
> BO34767.pep
MGGAGGKLLGLLLCLLFLTELHGVFMRFTNVTCESKDLSMSIVEYCAVTT
LSKNKNSISLRYAMLKPMFTNIEIYFQLMTRGSESIHAASNWQPFLHTMK
LDLCRFWKNHHNHLARMVFEFIDGHTNMNHTCPYTKEKYISIDDLTNTEV
SAKIRGVPMPKGFYALFTTWSTENITRVVTNFYFEVISPASFLDH
BO34767.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:43:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG33914-PC | 189 | CG33914-PC | 1..189 | 1..189 | 1011 | 100 | Plus |
CG33914-PB | 189 | CG33914-PB | 1..189 | 1..189 | 1011 | 100 | Plus |
CG33632-PA | 180 | CG33632-PA | 13..177 | 12..184 | 274 | 33.1 | Plus |
CG33689-PB | 178 | CG33689-PB | 3..173 | 7..186 | 236 | 29.8 | Plus |
CG33453-PB | 174 | CG33453-PB | 7..171 | 8..187 | 226 | 27.8 | Plus |