BO34781.complete Sequence
448 bp assembled on 2013-10-29
GenBank Submission: KX796978
> BO34781.complete
GAAGTTATCAGTCGACATGATATATCTACAGAGTTGCTGCTGCTGCGTGG
ATCTGCGAATCGGAACCATAGCAATAGGGATTTTGCACATTATAGCGGAT
ATCCTTGGAGGCACATTTGTTGCTTTATTTGGGGAGTCGGGTATTCCCGA
TTTGGGTCACACCCTATTCATTATCTTCGTTATGCTGCACATCCTGAGCT
GCGTTTTCCTGATCATCGGCAGTATACGGTTACGGAGCAGCTGGATGCTC
TTCTACATAATAATGACTATGATCATGGCGGTAGCAATGCTCATATTGAT
AGTATCCGACGTCATACTCGCCGTTTGTTTCTGGGTAATGATCACGTATG
CTATAATGTTCTTTATTTGCCTTTATTCCTGGCTAGTGGCGTACTCTTTT
TACGCCGCCTTAGGAGGACCTCTCTTCATCGCAAGCTTTCTAGACCAT
BO34781.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:32:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG43183-RA | 417 | CG43183-PA | 1..414 | 17..430 | 2070 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:32:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG43183-RA | 608 | CG43183-RA | 126..540 | 16..430 | 2075 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:32:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 8592641..8592774 | 229..362 | 670 | 100 | Plus |
| 2R | 25286936 | 2R | 8592320..8592447 | 16..143 | 640 | 100 | Plus |
| 2R | 25286936 | 2R | 8592495..8592584 | 140..229 | 450 | 100 | Plus |
| 2R | 25286936 | 2R | 8592834..8592901 | 363..430 | 340 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 14:32:26 has no hits.
BO34781.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-10-29 16:47:36 Download gff for
BO34781.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG43183-RA | 127..540 | 17..432 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:16:31 Download gff for
BO34781.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG43183-RA | 127..540 | 17..432 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:16:31 Download gff for
BO34781.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 8592496..8592584 | 141..229 | 100 | -> | Plus |
| 2R | 8592642..8592774 | 230..362 | 100 | -> | Plus |
| 2R | 8592834..8592901 | 363..432 | 97 | | Plus |
| 2R | 8592321..8592444 | 17..140 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-10-29 16:47:36 Download gff for
BO34781.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 4479826..4479949 | 17..140 | 100 | -> | Plus |
| arm_2R | 4480001..4480089 | 141..229 | 100 | -> | Plus |
| arm_2R | 4480147..4480279 | 230..362 | 100 | -> | Plus |
| arm_2R | 4480339..4480406 | 363..432 | 97 | | Plus |
BO34781.pep Sequence
Translation from 16 to 448
> BO34781.pep
MIYLQSCCCCVDLRIGTIAIGILHIIADILGGTFVALFGESGIPDLGHTL
FIIFVMLHILSCVFLIIGSIRLRSSWMLFYIIMTMIMAVAMLILIVSDVI
LAVCFWVMITYAIMFFICLYSWLVAYSFYAALGGPLFIASFLDH
BO34781.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:43:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG43183-PA | 138 | CG43183-PA | 1..138 | 1..138 | 713 | 100 | Plus |
| CG34230-PA | 129 | CG34230-PA | 1..126 | 1..132 | 148 | 27.4 | Plus |
